Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq19295 122 1e-22 >seq19295 Length=205138 Score = 122 bits (134), Expect = 1e-22 Identities = 273/407 (67%), Gaps = 10/407 (2%) Strand=Plus/Plus Query 175748 CCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 175807 || ||||| |||||||| | ||||| || | | |||||||| | |||| ||||||| Sbjct 36567 CCCGTGCCGATACCTTCAGCACCGTTAACTAAGATCATTGGAATAATAGGCAGATAGAAG 36626 Query 175808 TCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCGGA 175867 || ||||||||| | |||||| | ||||||||||||||| |||||| | | Sbjct 36627 TCGGGTTCAATCTTCTGGTTATCATCAAAGAGATAGTTGAGCACGGGATCATCCGAAGTA 36686 Query 175868 TCAAAGATTTTACGAGCATCCTTGG--TGAGTTTTGTGAAGATGTACCTCGTTTGAGACG 175925 ||| | | || || | ||| ||||||||||||| |||||||| | | |||| Sbjct 36687 GGAAATAGACTTCGTGC--CAATGGGCTGAGTTTTGTGAAAATGTACCTGG---GTGACG 36741 Query 175926 C---ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGA 175982 | ||||||||||||| || || || || |||||||| |||| || || |||| Sbjct 36742 CAGAATCTTTGCCACCCTGCAGCCGAGTACCGAATTGACCGATGGGCTGCAGTAGGTTGA 36801 Query 175983 TATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACTT 176042 | || || ||||| | | | ||||| ||||| || || | || || || Sbjct 36802 TGTTATTACTGCCCACGAAATTTTGGGCCAAGTTGACGATTGTCATCATTAGCGACTGTT 36861 Query 176043 CACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCT 176102 ||||||| || || |||||| | || || || | | || | ||| || || || | | Sbjct 36862 CACCGTGGTGATACGCCGACATTTCTGCTACGGATCCAGCAAGCTGGGCAACTTTGACTT 36921 Query 176103 CATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGT 176149 | ||| |||| | | |||||| | ||| ||||| | |||| Sbjct 36922 CTCGCTTATCGTTCCTCTTGAAGCAGGTGAACAATACCTTACGCTGT 36968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613350387559680