Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq17406 168 3e-36 seq6344 165 3e-35 seq2245 165 3e-35 seq19798 156 2e-32 seq19966 152 2e-31 seq20142 145 3e-29 seq7231 136 2e-26 seq19254 134 5e-26 seq19980 122 3e-22 >seq17406 Length=150836 Score = 168 bits (186), Expect = 3e-36 Identities = 456/689 (66%), Gaps = 13/689 (2%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 |||||| || || || || || || || |||||||| || ||||||| | | || || Sbjct 111695 AGCAATCGGCATCGACCTGGGCACGACGTTTTCATGCGTTGGTGTTTTTCGCCACGGGAA 111754 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 ||||| ||||| ||||| || || || |||| || ||||| | || || || Sbjct 111755 AGTAGAGATTATTGCAAACGAACAGGGTAATAGAACGACACCTTCGTACGTGGCGTTCAC 111814 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAAT--GGTAAATTCAAATGCCAAA 451090 |||| | ||| | || | || | || || ||| ||| ||| || | | Sbjct 111815 GGATACGGAACGGCTGATCGGCGATGCGGCCAAA--AATCAGGTGGCGATGAACCCGACG 111872 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 ||||| || | ||||| ||||| || ||||| || | ||| || | || |||||| Sbjct 111873 AACACTGTGTTCGATGCAAAACGCTTGATTGGACGACGCTTTGAAGAGCAAACCGTACAA 111932 Query 451151 AAAGAGAAAAAATTCTTTTC-TTATGATGTAGTAAA-TCAAAAAGGAAAGCCCTATATTC 451208 | || | ||| | || || || | ||| || | || | ||| | || | Sbjct 111933 AGCGACATGAAACATTGGTCGTTCAGAGTGACTAAGGTCGAC--GGTAGGCCAAAGATCC 111990 Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268 |||| ||| || || || || |||||| ||| ||||| || ||||| ||||| | Sbjct 111991 AAGTCGATTTCAAGGGCGAGGAAAAGACTTTTTATCCGGAAGAGATCTCATCGATGGTGC 112050 Query 451269 TTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 | | |||| |||||||| || || ||| ||| | ||| | || || || || || Sbjct 112051 T-AGTAAAGATGAAAGAGACGGCTGAAGCGTATCTAGGTCTGACCGTAACGGACGCCGTT 112109 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 ||||| || || || || ||||| ||| | ||||| ||||| ||||| |||||||| Sbjct 112110 ATTACGGTGCCGGCGTACTTCAACGATTCGCAACGACAAGCGACTAAGGATGCAGGCGCG 112169 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 || ||||| | || || | ||||| || || ||||| |||||||| || |||| ||| Sbjct 112170 ATAGCTGGACTGAACGTGTTGCGAATCATCAACGAACCCACAGCAGCCGCGATAGCGTAT 112229 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || || | || |||| | ||| |||| || || | | || || || ||||| Sbjct 112230 GGGCTTGACAAG---AAAGCAGCAGCAGAACGCAACGTTCTCATTTTCGACTTGGGTGGT 112286 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 || || ||| || | || || |||||||| ||||||||||| || || | || Sbjct 112287 GGTACATTCGATGTATCGATTCTGTCCATTGAAGACGGGGTATTTGAGGTGAAATCGACA 112346 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGA 451596 || ||||||||||| || |||||||| Sbjct 112347 GCAGGAGATACTCATCTCGGGGGTGAAGA 112375 >seq6344 Length=36387 Score = 165 bits (182), Expect = 3e-35 Identities = 408/607 (67%), Gaps = 19/607 (3%) Strand=Plus/Plus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||||| || || ||||| || ||||||| || || ||||| |||| |||||||| || Sbjct 22218 GCAATGGGTATCGATCTCGGTACCACCTACTCGTGCGTAGGAGTTTTTCAAAATGGCAAA 22277 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || |||||||| || |||||||| || ||| || ||||| ||| || |||||| Sbjct 22278 GTCGAAATTATTGCTAATGACCATGGTCTACGGACCACTCCCTCAGTCGTTGCTTTTACA 22337 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATC--AATGGTAAATTCAAATGCCAAAA 451091 || |||| | || | || | | ||||| || || || |||| ||| | | || Sbjct 22338 GAAACAGAGCGCTTTATTGGAGATCCAGCTAAGTCGCAAGCGTCAATT--AATCCAAGAA 22395 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 | || |||| ||| ||||| | ||||||| ||| | ||| | || || Sbjct 22396 ATACCGTATTTGACGCTAAGAGACTAATTGGGCGTCGCTTCGATAGCAAAGAGGTTCAGG 22455 Query 451152 AAGAGAAAAA--ATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATT 451207 |||| | || ||| | ||| || || | ||| |||| | || || | || Sbjct 22456 AAGATATTAAGCATTGGCCATTC----GAAGTTATCAATGAAAACGATAAACCTAAGATA 22511 Query 451208 CAAGTAAATTATAAAGGTGAAACTAA-AACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 || |||| | ||| | ||||| | ||| ||||||||||| || ||||| | ||||| Sbjct 22512 CAGGTAACCTTCAAAAAT-AAACTCAGAACATTTGCTCCTGAGGAGATTTCTGCGATGGT 22570 Query 451267 TCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTG-ATGCAG 451325 || | ||||||||| |||| || || || ||||| | || | | |||| | Sbjct 22571 GCTAAGTAAAATGAAGGAAATCGCTGAGACTTACCTTGGTG-TAAAGGTGGTCCATGCCG 22629 Query 451326 TAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGAC 451385 | || || || || ||||||||||| || | ||| |||| ||||| || ||||| || Sbjct 22630 TTATAACCGTACCAGCTTATTTCAACGACTCCCAAAGGCAGGCAACAAAGGATGCGGGCT 22689 Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT 451445 |||||||| ||||||||| | || || |||||||| || || || || || | |||| Sbjct 22690 CGATTGCTGGATTAAATGTTTTACGCATCATTAATGAGCCAACCGCTGCCGCAATTGCAT 22749 Query 451446 ATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTG 451505 ||||| | ||| || || | || || | ||| || | | |||||||| || | Sbjct 22750 ATGGA-TTGGACAA--GAAGCTCAAAGGGGATCAGAATGTTCTTATTTTTGATTTAGGAG 22806 Query 451506 GAGGAAC 451512 ||||||| Sbjct 22807 GAGGAAC 22813 >seq2245 Length=42734 Score = 165 bits (182), Expect = 3e-35 Identities = 170/221 (77%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291 ||| ||||| | ||||| || |||||||| ||||||||||| ||||||||| ||| ||| Sbjct 31973 AAAGCTTTTTC-CCTGAGGAGATTTCATCGATGGTTCTTACCAAAATGAAAAAAATTGCA 31915 Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351 ||| || ||||| ||||| | |||||||||||||| ||||| ||||||||||| Sbjct 31914 GAAGCTTACCTTGGTAACACAGTTTCGGATGCAGTAATTACGGTTCCGGCTTATTTCAAC 31855 Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411 ||| | ||| |||| | || || || | | | ||| |||| ||||||| ||| || Sbjct 31854 GATTCGCAAAGGCAGTCTACGAAGGACGTTGCAATTATCGCTGTCCTAAATGTACTTTGA 31795 Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 || |||| ||||||||||||||||| | || |||||||| Sbjct 31794 ATAATTAGCAAACCTACAGCAGCTGCTATCGCCTATGGACT 31754 Score = 91.5 bits (100), Expect = 6e-13 Identities = 129/180 (72%), Gaps = 1/180 (1%) Strand=Plus/Plus Query 451259 TCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACT 451318 || |||||| ||| |||||||||||| | |||||| || |||| ||||| | Sbjct 38527 TCGATGGTTTTTATTAAAATGAAAGAGATTGCAGAAGCTTACTTTGGCAGCGCAGTTTCG 38586 Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 ||| | || ||||| |||| ||||||||| | ||| | ||| |||| || || || || Sbjct 38587 GATACGGTTATTACGGTTCTGGCTTATTTC-ACGATTCGCAAAGGCAGGCTACAAAGGAC 38645 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 | ||| || |||| | | | ||| || || || ||||| || |||||| |||||||| Sbjct 38646 CCTGGAACCATCGCTGATCTGAGTGTACTCCGGATCATTAACGAGCCTACAACAGCTGCT 38705 >seq19798 Length=669122 Score = 156 bits (172), Expect = 2e-32 Identities = 269/388 (69%), Gaps = 7/388 (2%) Strand=Plus/Plus Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279 ||||| || |||| |||||| || || || || ||||| ||||| | || |||||| Sbjct 259199 AAAGGAGAGTCTAAGACTTTTTTCCCAGAGGAGATCTCATCAATGGTGTTGACAAAAATG 259258 Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCC 451339 || || | || || || | || || | ||| || | || ||||| || || || Sbjct 259259 AAGGAGATCGCTGAGGCGTACCTGGGCACTTCTGTTTCTCACGCCGTAATCACAGTGCCT 259318 Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399 || || ||||||||| | || || || ||||| || ||||| ||| |||||||||||| Sbjct 259319 GCGTACTTCAATGATTCCCAGCGTCAGGCAACCAAGGATGCCGGAACCATTGCTGGTTTA 259378 Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459 ||||| || || |||||||| || || ||||| ||||| | || ||||| |||| || Sbjct 259379 AATGTGCTCCGCATTATTAACGAGCCGACAGCTGCTGCCATTGCCTATGGTCTAGATAA- 259437 Query 451460 TCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGAT 451519 |||| | ||| ||| || | | | || ||| | || || || ||| | Sbjct 259438 --GAAAGGATCAGGTGAACGTAACGTCCTTATCTTCGATCTGGGCGGCGGCACT--TTCG 259493 Query 451520 ACTTCTGTACTTT--CAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATA 451577 || | | | ||| | ||||||||||| | |||||||| || |||| ||||||| Sbjct 259494 ACGTGTCAATTTTAACTATTGAAGATGGCATTTTTGAAGTCAAATCAACTGCAGGTGATA 259553 Query 451578 CTCATCTAGGAGGTGAAGATATTGATAA 451605 | ||| | ||||| |||||| ||||||| Sbjct 259554 CGCATTTGGGAGGAGAAGATTTTGATAA 259581 Score = 140 bits (154), Expect = 1e-27 Identities = 377/568 (66%), Gaps = 14/568 (2%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 ||||| |||||||| ||||| || || || || || ||||| |||||| ||| ||| | Sbjct 259967 AATCCCGATGAAGCCGTTGCGTACGGAGCGGCGGTACAAGCTGCTATTTTAATGGGTG-A 260025 Query 452051 GATGATGAAAAAT-TAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | | | || | | ||| | || || | ||||| |||||| | || ||||| | Sbjct 260026 TAAGTCGGAAGCTGTTCAAGACCTACTTTTGCTTGATGTGACACCTTTGTCCCTTGGTAT 260085 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 || || || || || | ||||| | | ||||||||| ||| |||| || || Sbjct 260086 CGAGACCGCCGGCGGTGTTATGACCGTTCTTATTAAACGAAATACTACTATACC----AA 260141 Query 452170 AA----AGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAG 452225 | ||| ||||||||||| ||| || || || || ||||| ||||| | Sbjct 260142 CACGTCAGACTCAAACATTTACGACATACTCAGACAATCAGCCTGGTGTGCTGATTCAGG 260201 Query 452226 TGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTT 452285 | | || |||||||| || ||||| ||| || || ||||| |||| ||| Sbjct 260202 TTTACGAGGGAGAACGCGCTATGACGAAAGACAACAACCTTCTAGGTAAATTCGAGCTTA 260261 Query 452286 CAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATG 452345 | ||||| ||| || | || || || ||||| |||| | ||| |||| | Sbjct 260262 CGGGTATTCCGCCTGCACCTCGTGGTGTACCACAGATTGAGGTTACATTTGACATTGACG 260321 Query 452346 CAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTA 452405 | ||||| || ||||| ||| |||| ||| || || ||||||| | | || || | Sbjct 260322 CCAATGGAATCCTTAACGTGTCGGCAGCTGACAAGTCGACTGGAAAGGAAAACAAGATCA 260381 Query 452406 CAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAG 452465 | ||||| || ||||| ||| | |||||||| ||||||||| ||||| | |||| Sbjct 260382 CGATTACAAACGATAAGGGTCGTCTTTCTAAAGAGGATATTGAACGTATGGTCAAGGAAG 260441 Query 452466 CAGAAAAATTCAAGGATGATGATGAACAAGTTAGAA-AACATG-TTGAAGCTAAAAACAA 452523 | || | | |||||||| || | ||||| |||| |||| | ||| || ||||| Sbjct 260442 CCGAGCAGTATAAGGATGAAGACG-ACAAG-CAGAAGAACAAGATTGCTGCGAAAAATGC 260499 Query 452524 ACTAGAAGGATATTGTTATCAAATGAAA 452551 || || |||||||| || ||||||| Sbjct 260500 GCTTGAGGGATATTGCTACACAATGAAA 260527 >seq19966 Length=197524 Score = 152 bits (168), Expect = 2e-31 Identities = 250/360 (69%), Gaps = 8/360 (2%) Strand=Plus/Minus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 |||||||||||||| ||||| | ||||| ||||| || ||||| || || || ||| Sbjct 8048 TTTGCTCCTGAAGAGATTTCTGCAATGGTGCTTACAAAGATGAAGGAGACTGCGGAAACT 7989 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 ||| |||| || || | || || |||| || || || |||||||| ||||| Sbjct 7988 TATCTTGGCAAAAAGGTAACGCACGCCGTTGTTACGGTACCAGCATATTTCAACGATGCC 7929 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 || || || ||||| ||||| || ||| ||||||||| | || || | || || || Sbjct 7928 CAGCGTCAGGCAACAAAAGACGCGGGAACCATTGCTGGTCTCAACGTGATGCGCATCATC 7869 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA-GAAGa 451476 || ||||| || || |||||| | ||||| ||||| | | |||||| | | || Sbjct 7868 AACGAACCGACGGCCGCTGCTATTGCATACGGACTCG-------ATAAGAAAGATGGTGA 7816 Query 451477 aaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAAT 451536 ||| || || || || || ||||| || || || || ||| ||| | ||| | || Sbjct 7815 AAAGAACATCTTGGTGTTCGATTTGGGCGGGGGCACCTTCGATGTATCTCTTCTTACGAT 7756 Query 451537 TGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 || | || || || |||||| | ||||| |||||||| ||||| ||||| ||||| Sbjct 7755 CGATAACGGCGTTTTCGAAGTAGTATCGACCAACGGTGATACACATCTTGGAGGAGAAGA 7696 >seq20142 Length=86619 Score = 145 bits (160), Expect = 3e-29 Identities = 205/286 (72%), Gaps = 9/286 (3%) Strand=Plus/Plus Query 451321 TGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGC 451380 ||| || || ||||| || ||||| ||||| ||| |||| |||||||||| |||||||| Sbjct 58898 TGCCGTTATAACTGTGCCGGCTTACTTCAACGATTCACAGAGGCAAGCAACAAAAGATGC 58957 Query 451381 AGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCT 451440 ||| |||||||| |||| || ||| |||| |||||||||||||| || || || | Sbjct 58958 TGGAACCATTGCTGGACTAAACGTACTTAGAATCATTAATGAACCTACGGCTGCAGCGAT 59017 Query 451441 AGCATATGGACTAG---GAAA-----ATCAAAAGAAACAGAA-GaaaaaaaTATTTTAGT 451491 || |||||||| | || | | ||| | |||| ||| ||| | || | Sbjct 59018 CGCGTATGGACTCGATAGAGACGCTTCTGGAAACATTAAGAAGGAATGCAATGTGCTAAT 59077 Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATT 451551 || ||||| |||||||| ||| ||| || | || ||||| |||||||| | || Sbjct 59078 TTTCGATTTAGGTGGAGGCACTTTCGATGTGTCGATTCTATCAATCGAAGATGGCCTTTT 59137 Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 ||||| ||| | || |||||||||||| ||||||| |||||| Sbjct 59138 CGAAGTCAAGTCGACAGCAGGTGATACTCATTTAGGAGGCGAAGAT 59183 >seq7231 Length=219762 Score = 136 bits (150), Expect = 2e-26 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||||||||| || |||| || ||||| || || ||||| ||||| | || Sbjct 92384 AATGCAAATTTTCGTTAAGACGTTGACCGGAAAAACCATAACCCTTGAGGTTGAGCCCTC 92325 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||| ||| | || ||||||||| ||||||||||| || || |||||||| Sbjct 92324 GGATACCATCGAAAACGTAAAGGCAAAAATTCAGGATAAGGAAGGCATCCCCCCTGATCA 92265 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | || ||| | || |||||||| || |||||| | || || | ||||| || Sbjct 92264 GCAGCGTCTTATATTCGCTGGAAAACAACTCGAGGATGGACGTACCCTGTCCGATTACAA 92205 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 |||| | || || |||| || ||||| || Sbjct 92204 TATTCAGAAAGAATCAACTCTGCACTTGGT 92175 Score = 116 bits (128), Expect = 1e-20 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || || || || |||||||| || || || || ||||| Sbjct 100207 AATGCAGATTTTCGTGAAGACGCTCACAGGCAAAACTATCACACTCGAGGTAGAATCCAG 100148 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| ||||||| | || |||||||| || || |||||||| ||||||||||| Sbjct 100147 TGATACCATTGAAAACGTCAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCTGATCA 100088 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | ||||||| | || ||||| || |||||||| | ||| | | || ||||| Sbjct 100087 ACAGAGGCTAATTTTTGCTGGTAAACAGCTCGAAGATGGTCGTACTCTATCTGACTATAA 100028 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | || || | || ||||| Sbjct 100027 CATTCAGAAAGAGTCTACTCTTCA 100004 Score = 100 bits (110), Expect = 1e-15 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || ||||| ||||| || || ||||| |||||| | Sbjct 93898 ATGCAGATCTTTGTGAAGACGCTCACTGGAAAAACCATCACCCTTGAAGTTGAACCCAGC 93839 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | || |||||| || ||||| || || || ||||| ||||| Sbjct 93838 GATACAATTGAAAATGTGAAGGCAAAAATCCAGGATAAAGAGGGCATCCCTCCGGATCAG 93779 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || || | || || ||||| ||||| || | || | | ||||||||| Sbjct 93778 CAACGTCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCCGTACCCTCTCAGATTATAAT 93719 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | ||||| || Sbjct 93718 ATTCAAAAGGAGTCGACACTGCA 93696 Score = 100 bits (110), Expect = 1e-15 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || || || || |||||||| || || ||||| | ||| Sbjct 100662 ATGCAGATCTTCGTGAAAACCCTTACCGGAAAGACTATTACCCTGGAAGTTGAGCCCTCT 100603 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | ||||| ||||| ||||| || ||||| || ||||| |||||| Sbjct 100602 GACACAATTGAGAATGTTAAAGCGAAAATCCAAGACAAAGAAGGTATCCCTCCAGATCAA 100543 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207 || | || || || | || |||||||||||||| || Sbjct 100542 CAGAGGTTGATCTTTGCCGGTAAACAACTTGAAGACGG 100505 Score = 93.3 bits (102), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || ||||| || ||||| |||||| | Sbjct 93670 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACTATCACACTTGAGGTTGAACCCAGC 93611 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | || ||||| || || ||||| || ||||||||||| || Sbjct 93610 GATACAATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 93551 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | |||||| | || |||||||| || ||||| | || | || || || Sbjct 93550 CAACGTCTCATTTTCGCCGGAAAACAACTCGAGGATGGTCGCACACTCAGTGACTACAAC 93491 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| || |||||||| || Sbjct 93490 ATTCAAAAGGAAAGCACGCTTCACTTGGT 93462 Score = 86.0 bits (94), Expect = 2e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || ||||| || || || ||||| || || ||||| ||||| || Sbjct 93027 AATGCAGATTTTTGTGAAAACCCTTACGGGAAAAACAATAACACTTGAAGTTGAGCCAAG 92968 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | |||||| | ||| ||||||||||| || || || ||||| ||||| || Sbjct 92967 CGACACCATTGAGAACGTAAAAGCGAAAATTCAAGACAAAGAGGGCATTCCGCCTGACCA 92908 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||| | || || | || |||||||| || || || | || | |||| || || Sbjct 92907 ACAGCGTCTCATCTTTGCTGGAAAACAACTCGAGGACGGTCGCACGCTATCGGACTACAA 92848 Query 391229 TATTGATAAGGA 391240 || | ||||| Sbjct 92847 CATCCAGAAGGA 92836 Score = 86.0 bits (94), Expect = 2e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || || || || || || || || ||||| || || |||| Sbjct 93443 AATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACGATCACGCTTGAAGTCGAGCCATC 93384 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | |||||| | | ||| ||| || || || || || || ||||||||||| || Sbjct 93383 CGACACAATTGAAAATGTCAAAGCAAAGATCCAGGACAAAGAGGGCATTCCTCCTGACCA 93324 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||| ||||| | || ||||| | || ||||| | || | |||||||| Sbjct 93323 GCAACGTTTGATTTTTGCTGGAAAACAGTTGGAGGATGGCCGCACCCTTAACGATTATAA 93264 Query 391229 TATTGATAAGGA 391240 ||| | ||||| Sbjct 93263 CATTCAGAAGGA 93252 >seq19254 Length=91858 Score = 134 bits (148), Expect = 5e-26 Identities = 223/317 (70%), Gaps = 4/317 (1%) Strand=Plus/Plus Query 452176 TCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGG 452235 |||||| || ||||| ||| || || |||| || ||||||||||||| |||||| Sbjct 89434 TCAAACTTTCAGTACTTTCGCTGACAATCAGCCAGCCGTCACTATTCAAGTGTATGAAGG 89493 Query 452236 AGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTT-TCAAACATTC 452294 || || ||||||||| ||| |||||| ||| || ||| || ||| ||||| Sbjct 89494 TGAGCGCGCAATGACAAAAGACAATAATTTACTTGG-GAAGTTCGACTTGAGCGGCATTC 89552 Query 452295 CTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTA 452354 | || ||| | || ||||| || ||| | || | ||| | ||||| || ||| Sbjct 89553 CGCCAGCGCCTCGAGGTGTACCTCAGATCGAAGTGACGTTCGATATCGATGCGAACTGTA 89612 Query 452355 TTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAA-AAAATTACAATTACT 452413 | | || ||| ||| || || |||||| |||||||| ||||| || ||||| ||||| Sbjct 89613 TCTTGAACGTGTCTGCCGTCGACAAATCAACTGGAAAA-CAGAATAAGATTACGATTACG 89671 Query 452414 AATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAA 452473 ||||| || |||| |||| || ||||| ||||| |||||| | ||||| |||| | Sbjct 89672 AATGACAAGGGCCGTCTATCCAAGGAAGACATTGAGCGAATGGTGAAAGAAGCTGAAACA 89731 Query 452474 TTCAAGGATGATGATGA 452490 || || || || || || Sbjct 89732 TTTAAAGACGAGGACGA 89748 Score = 129 bits (142), Expect = 2e-24 Identities = 456/706 (65%), Gaps = 15/706 (2%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||| ||||||||||| || |||| || || || || || | || |||| || Sbjct 81136 AGCCATTGGTATTGATCTTGGCACGACCTACTCCTGCGTGGGAGTGTTCCGCCATGGCAA 81077 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCAC-GAACTACTCCTTCATGGGTAAGTTTTA 451031 || || ||||| || || ||||| || | || | || ||||| || | || |||| Sbjct 81076 GGTTGAGATTATCGCGAACGACCAGGG-TAACAGGACAACTCCGTCGTACGTCGCATTTA 81018 Query 451032 CGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCAAAA 451091 ||||| | |||||| | | || | ||||| ||| || | || | | | Sbjct 81017 CGGATACGGAAAGATTGGTTGGCGATGCTGCGAAAAACCAGGCCGCTCTCAACCCTACTA 80958 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 |||| || | || ||||| || ||||| || | || || || | ||||| || | Sbjct 80957 ACACTGTGTTCGACGCTAAGCGCTTAATCGGAAGACGGTTCGACGACCAGACTGTTCAGA 80898 Query 451152 AAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211 | || | || | | || | | | || | || |||| || ||| | ||||||| Sbjct 80897 ACGATATGAAGTGTTGGTCATTTAAAGTGATCAACGAAAACGGCCGGCCGAAGATTCAAG 80838 Query 451212 TAAATT--ATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCT 451269 | | | | ||| | |||| | || || | | | |||||| || || || ||||| | Sbjct 80837 TGCAGTTCAAAAACGAGAAAA-AGAATTTCTACGC-TGAAGAGATCTCGTCGATGGTATT 80780 Query 451270 TACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAAT 451329 | || ||||| ||||| || || || | || | || || ||||| || || Sbjct 80779 AATCAAGATGAAGGAAACCGCTGAGTCTTACCTCGGGGGTAAGGTAACCGATGCCGTGAT 80720 Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389 || || || || || ||||| ||| | ||||| || ||||| |||||||| || ||| Sbjct 80719 CACGGTACCTGCGTACTTCAACGATTCGCAACGACAGGCAACAAAAGATGCTGGTACTAT 80660 Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 |||||| |||| || | || || || ||||| || ||||| || || | |||||||| Sbjct 80659 TGCTGGGCTAAACGTGTTGCGTATCATCAATGAGCCCACAGCTGCAGCCATTGCATATGG 80600 Query 451450 ACTAG----GAAAATCAAAAGAAAC-----AGAAGaaaaaaaTATTTTAGTATTTGATTT 451500 |||| |||| | | ||| | || ||||| ||| || | | || || | Sbjct 80599 CCTAGACAAGAAAGTGGCAGGAACCGCTAAAGGTGAAAAGAATGTTCTGATCTTCGACCT 80540 Query 451501 TGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAA 451560 || || || || |||| ||| | || || ||||| | ||| || || || || || Sbjct 80539 GGGCGGTGGTACCTTTGATGTTTCAATTCTCTCTATTGATGGTGGTGTTTTCGAGGTTAA 80480 Query 451561 GGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 | || || ||||||||||| || || || ||| | || ||| Sbjct 80479 ATCCACAGCCGGAGATACTCATCTCGGCGGCGAGGATTTCGACAAT 80434 Score = 122 bits (134), Expect = 3e-22 Identities = 255/378 (67%), Gaps = 3/378 (1%) Strand=Plus/Plus Query 451219 TAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAAT 451278 ||||||||||| ||||| || || |||||||| ||||| ||||| || || || Sbjct 88480 TAAAGGTGAAAAAAAAACCTTCTTCCCGGAAGAAATCTCATCGATGGTGCTGGTGAAGAT 88539 Query 451279 GAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCC 451338 ||| ||||| || || || | || | | || |||| |||||||| || || || Sbjct 88540 GAAGGAAACTGCCGAGGCGTACCTGGGCGGTACCGTATCTGACGCAGTAATCACGGTACC 88599 Query 451339 CGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTT 451398 || ||||| ||||| |||| || ||||| || || ||||| || ||||| || || Sbjct 88600 GGCCTATTTTAATGACTCACAGCGTCAAGCTACAAAGGATGCTGGCACCATTGCCGGCTT 88659 Query 451399 AAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAA 451458 ||| || ||||| ||||| ||||| || || || || || | || ||||| || ||| | Sbjct 88660 AAACGTGCTTCGTATTATCAATGAGCCAACTGCGGCAGCCATTGCTTATGGCCT-GGACA 88718 Query 451459 ATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGA 451518 | || | || | ||| || || | |||| ||| | || || || || || Sbjct 88719 A--GAAGGCCACGGGCGAACGCAACGTTCTCATATTCGATCTGGGCGGTGGCACATTCGA 88776 Query 451519 TACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATAC 451578 | || | ||| |||| || ||||| || || ||||| || | || ||| || || Sbjct 88777 TGTGTCGATCCTTACAATCGAGGATGGCGTGTTCGAAGTTAAATCGACTGCTGGAGACAC 88836 Query 451579 TCATCTAGGAGGTGAAGA 451596 || || || ||||| || Sbjct 88837 GCACCTTGGTGGTGAGGA 88854 >seq19980 Length=299602 Score = 122 bits (134), Expect = 3e-22 Identities = 162/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| |||||||| || || || ||||| || |||||||| || || || Sbjct 144964 ATGCAGATTTTTGTTAAAACGCTTACCGGAAAAACGATCACTCTTGAAGTCGAGCCAAGC 145023 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| ||||| ||||||||||| |||||||||||||| || |||||| Sbjct 145024 GATACGATTGAGAACGTTAAAGCCAAAATTCAAGACAAGGAAGGAATTCCCCCCGATCAA 145083 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || |||||| |||| ||||| || || ||||| | || | | || || || Sbjct 145084 CAAAGGTTGATTTTCGCAGGCAAACAGCTCGAGGATGGTCGCACGCTCTCCGACTACAAC 145143 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 ||| | || || | || ||||| | || | ||||| ||||| Sbjct 145144 ATTCAAAAAGAGTCTACCCTTCATCTGGTGCTGAGACTCCGAGGA 145188 Score = 102 bits (112), Expect = 3e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || ||||| || || || || | || || || | ||| Sbjct 144736 ATGCAAATTTTCGTCAAAACCCTTACTGGGAAGACCATCACCTTGGAAGTGGAGCCTTCT 144795 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | || || |||||||| |||||||||||||| || |||||| Sbjct 144796 GATACAATTGAGAACGTAAAGGCCAAGATTCAAGACAAGGAAGGAATTCCCCCCGATCAA 144855 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || || || |||||||||||| | || | |||| || ||| Sbjct 144856 CAGAGATTGATCTTTGCCGGAAAGCAGCTTGAAGATGGACGCACCCTTTCGGACTACAAT 144915 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| | || || ||| Sbjct 144916 ATTCAAAAGGAGTCCACCCTCCAC 144939 Score = 91.5 bits (100), Expect = 6e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || ||||| | || || || ||||| || ||||| || || || || Sbjct 144279 AATGCAAATTTTTGTGAAAACTTTAACCGGAAAGACTATCACCCTTGAGGTGGAGTCTTC 144338 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || ||| | | || || |||||||||||||| || ||||| || || || Sbjct 144339 TGATACAATCGAAAATGTCAAGGCGAAGATTCAAGATAAGGAGGGGATTCCCCCAGACCA 144398 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | ||||| || | || ||||| | ||||| ||| | ||| | | ||||| || Sbjct 144399 GCAGAGGTTAATCTTTGCTGGTAAACAGTTGGAAGACGGACGTACTCTTTCTGATTACAA 144458 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | || || | || ||||| | || || | ||| |||| Sbjct 144459 CATCCAGAAAGAATCGACCCTTCATCTTGTCTTGCGTCTGCGAGG 144503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975200781536384