Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq19295 102 1e-16
>seq19295
Length=205138
Score = 102 bits (112), Expect = 1e-16
Identities = 276/420 (66%), Gaps = 2/420 (0%)
Strand=Plus/Plus
Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAAAAG 168350
||||| ||||||||||| | || || || | | |||||| || | |||| || |||
Sbjct 36567 CCCGTGCCGATACCTTCAGCACCGTTAACTAAGATCATTGGAATAATAGGCAGATAGAAG 36626
Query 168351 TCTGGTTCAATTGAGCGCCCATCATCATCCAAGTAGTTGAGGATCGGGTCATCCCGAGGA 168410
|| |||||||| | ||||||| | |||||||| | || |||||| || |
Sbjct 36627 TCGGGTTCAATCTTCTGGTTATCATCAAAGAGATAGTTGAGCACGGGATCATCCGAAGTA 36686
Query 168411 TCAAAGATCTTGCGAGCCTCTTTGGTAAGTTTTGTGAAAATGTACCTCGTCTGA-GAAGC 168469
||| | | || ||| | | | |||||||||||||||||||| | ||| | ||
Sbjct 36687 GGAAATAGACTTCGTGCCAATGGGCTGAGTTTTGTGAAAATGTACCT-GGGTGACGCAGA 36745
Query 168470 ATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGTT 168529
||| || |||||| || || ||||| |||||||| || | || ||||| |||||
Sbjct 36746 ATCTTTGCCACCCTGCAGCCGAGTACCGAATTGACCGATGGGCTGCAGTAGGTTGATGTT 36805
Query 168530 GTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTGTCCGCTAAGGATACTTCACC 168589
|| ||| | | | | ||||| || || || || | || || ||||||
Sbjct 36806 ATTACTGCCCACGAAATTTTGGGCCAAGTTGACGATTGTCATCATTAGCGACTGTTCACC 36865
Query 168590 ATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTCATC 168649
||||| ||||| ||| | || || || || | || || || || || || | |||
Sbjct 36866 GTGGTGATACGCCGACATTTCTGCTACGGATCCAGCAAGCTGGGCAACTTTGACTTCTCG 36925
Query 168650 CTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGACCATC 168709
||| ||| | | |||||| | ||| || || | |||| || || ||||||||
Sbjct 36926 CTTATCGTTCCTCTTGAAGCAGGTGAACAATACCTTACGCTGTCCTGGTTTAAGACCATC 36985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589830000907520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |