Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_015584.1 Length=75960 Score E Sequences producing significant alignments: (Bits) Value seq19061 107 9e-19 >seq19061 Length=15585 Score = 107 bits (118), Expect = 9e-19 Identities = 193/281 (69%), Gaps = 6/281 (2%) Strand=Plus/Minus Query 55498 GGCAACCTTACCGCTGATCCGGAATTGCGGTTCCTTGAGTCGGGCGTGGCCGTCGCTCAG 55557 |||||| | || || ||||| || |||||||| | | |||| ||||||||| | Sbjct 14185 GGCAACTTGACGGCCGATCCCGAGCTGCGGTTCACACCGACCGGCGCGGCCGTCGCGAAC 14126 Query 55558 TTCTCCGTGGCGTCTACGCCTCGGGT-TAAGA-----AGGGCGACGAGTGGGTGGACGGT 55611 ||| |||| ||||| ||||||||| | || || | |||||||| |||||| Sbjct 14125 TTCACCGTCGCGTCGACGCCTCGGACCTTCGACCGTCAGACCAACGAGTGGAAGGACGGC 14066 Query 55612 GAGACGGTGTTCCTCCGTACCACTGTGTGGCGCGAGCTGGCTGAGGGTGCCGCTGAGGCC 55671 || || ||||| | || || | ||||||||| || ||| | || ||| | Sbjct 14065 GAAGCGCTGTTCTTGCGCTGCAACATCTGGCGCGAGGCCGCGGAGAACGTGGCCGAGTCG 14006 Query 55672 CTGCGTAAGGGTGACTCTGTTGTGGTGATCGGCAAGCTCAAGCAGCGGTCGTTTGAGACC 55731 ||| | ||| | || | |||| ||||| |||||||||||| |||| |||||| Sbjct 14005 CTGACCAGGGGCGCGCGCGTCATCGTGACCGGCAGGCTCAAGCAGCGCTCGTACGAGACC 13946 Query 55732 CGCGAGGGTGAGAAGCGGTCCGTGTTTGAAATCGACGGCGA 55772 |||||||| ||||||||| |||| | || |||| | ||| Sbjct 13945 CGCGAGGGCGAGAAGCGGACCGTCGTCGAGCTCGAAGTCGA 13905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242886655128288