Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_016765.1
Length=54024
Score E
Sequences producing significant alignments: (Bits) Value
seq19061 86.0 2e-12
seq17892 82.4 3e-11
>seq19061
Length=15585
Score = 86.0 bits (94), Expect = 2e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 45539 CTCTGCCAGCTCAACCGAGGTTGCGAGTCTCGCCCCGACAAGCGTCCGGTCCTCAGCGAC 45598
||| |||||||||||||||| |||| ||| |||||||||||||| || |||
Sbjct 10620 CTCAGCCAGCTCAACCGAGGGCCCGAGCAGCGCACCGACAAGCGTCCGCAGGTCTCGGAC 10561
Query 45599 CTGCGCGAGTCCGGCGCCATTGAGCAAGACGCCGACATCGTCATGTTCGTGTACCGC 45655
||||||||||| || | | ||||| ||||||||||| || || | ||| |||||
Sbjct 10560 CTGCGCGAGTCTGGATCGTTGGAGCAGGACGCCGACATGGTTATCCTGGTGCACCGC 10504
>seq17892
Length=510
Score = 82.4 bits (90), Expect = 3e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 38379 TCGCTGATGTCCTGCAGGCGCTCGACGCGAACAGCGGTGATCTCCAGCAGGATGCGGGAG 38438
||||||||||| ||||| ||||||| ||| || |||| | || ||| |||||||||
Sbjct 427 TCGCTGATGTCGTGCAGCCGCTCGATGCGGACCTCGGTCACTTCGAGCGTGATGCGGGAC 486
Query 38439 GCCCAGCGGGGCATGTGGAT 38458
||||| ||||||||||||||
Sbjct 487 GCCCATCGGGGCATGTGGAT 506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 172713251582336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |