Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_018848.1
Length=37612
Score E
Sequences producing significant alignments: (Bits) Value
seq19061 134 3e-27
>seq19061
Length=15585
Score = 134 bits (148), Expect = 3e-27
Identities = 226/324 (70%), Gaps = 5/324 (2%)
Strand=Plus/Minus
Query 30169 ATGGCCGGAGACACCCCGATCACCGTTGTGGGCAACGTCGTTGCCGACCCCGAACTCAGG 30228
||||| || |||||| ||||| || || |||||| | ||||| ||||| || ||
Sbjct 14215 ATGGCAGGCGACACCGTCATCACTGTGGTCGGCAACTTGACGGCCGATCCCGAGCTGCGG 14156
Query 30229 TTCACCCCCGCCGGCGCCGCCGTCGCGAACTTCCGGCTCGCCTCGACCCCCCGCACGTTC 30288
||||| || ||||||| ||||||||||||||| |||| ||||| || || || |||
Sbjct 14155 TTCACACCGACCGGCGCGGCCGTCGCGAACTTCACCGTCGCGTCGACGCCTCGGACCTTC 14096
Query 30289 GACCGCACCGCCAACGAATGGCGAGACGGCGAGACCCTGTTCCTGTCCGTCTCCGTATGG 30348
||||| ||||||| ||| |||||||| | |||||| || | | | | |||
Sbjct 14095 GACCGTCAGACCAACGAGTGGAAGGACGGCGAAGCGCTGTTCTTGCGCTGCAACATCTGG 14036
Query 30349 CGCCAGCAGGCCGAGAACGTCGCCGGATCCATCCACCGCGGCGACCGCGTGATCGTCGTC 30408
||| || || |||||||| |||| || | | | |||| ||||| ||||| |
Sbjct 14035 CGCGAGGCCGCGGAGAACGTGGCCGAGTCGCTGACCAGGGGCGCGCGCGTCATCGTGACC 13976
Query 30409 GGCACCCTCGCCCAGCGCACGTACGAGA---AGGACGGCGAG-CGCCGAGCGTCCTACGA 30464
|||| ||| |||||| ||||||||| || |||||| || || |||| | |||
Sbjct 13975 GGCAGGCTCAAGCAGCGCTCGTACGAGACCCGCGAGGGCGAGAAGCGGACCGTCGT-CGA 13917
Query 30465 GGTCAAGGCCGAGGAAGTCGGCCC 30488
| || | | ||| || |||| ||
Sbjct 13916 GCTCGAAGTCGACGAGATCGGGCC 13893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120207604100224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |