Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_018848.1 Length=37612 Score E Sequences producing significant alignments: (Bits) Value seq19061 134 3e-27 >seq19061 Length=15585 Score = 134 bits (148), Expect = 3e-27 Identities = 226/324 (70%), Gaps = 5/324 (2%) Strand=Plus/Minus Query 30169 ATGGCCGGAGACACCCCGATCACCGTTGTGGGCAACGTCGTTGCCGACCCCGAACTCAGG 30228 ||||| || |||||| ||||| || || |||||| | ||||| ||||| || || Sbjct 14215 ATGGCAGGCGACACCGTCATCACTGTGGTCGGCAACTTGACGGCCGATCCCGAGCTGCGG 14156 Query 30229 TTCACCCCCGCCGGCGCCGCCGTCGCGAACTTCCGGCTCGCCTCGACCCCCCGCACGTTC 30288 ||||| || ||||||| ||||||||||||||| |||| ||||| || || || ||| Sbjct 14155 TTCACACCGACCGGCGCGGCCGTCGCGAACTTCACCGTCGCGTCGACGCCTCGGACCTTC 14096 Query 30289 GACCGCACCGCCAACGAATGGCGAGACGGCGAGACCCTGTTCCTGTCCGTCTCCGTATGG 30348 ||||| ||||||| ||| |||||||| | |||||| || | | | | ||| Sbjct 14095 GACCGTCAGACCAACGAGTGGAAGGACGGCGAAGCGCTGTTCTTGCGCTGCAACATCTGG 14036 Query 30349 CGCCAGCAGGCCGAGAACGTCGCCGGATCCATCCACCGCGGCGACCGCGTGATCGTCGTC 30408 ||| || || |||||||| |||| || | | | |||| ||||| ||||| | Sbjct 14035 CGCGAGGCCGCGGAGAACGTGGCCGAGTCGCTGACCAGGGGCGCGCGCGTCATCGTGACC 13976 Query 30409 GGCACCCTCGCCCAGCGCACGTACGAGA---AGGACGGCGAG-CGCCGAGCGTCCTACGA 30464 |||| ||| |||||| ||||||||| || |||||| || || |||| | ||| Sbjct 13975 GGCAGGCTCAAGCAGCGCTCGTACGAGACCCGCGAGGGCGAGAAGCGGACCGTCGT-CGA 13917 Query 30465 GGTCAAGGCCGAGGAAGTCGGCCC 30488 | || | | ||| || |||| || Sbjct 13916 GCTCGAAGTCGACGAGATCGGGCC 13893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120207604100224