Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_021308.1 Length=52617 Score E Sequences producing significant alignments: (Bits) Value seq12266 109 2e-19 >seq12266 Length=386 Score = 109 bits (120), Expect = 2e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 28760 TCCTCTCCCGGATCGCCTCCAACTCCCCCTCGGCCACGCCAGCGATGACGTTGGCGACCA 28819 ||| ||| ||||||||||||| ||| || ||||| ||||||||||||||| | || || | Sbjct 133 TCCGCTCTCGGATCGCCTCCAGCTCGCCTTCGGCAACGCCAGCGATGACGCTTGCAACGA 74 Query 28820 TGCGACCGATCCACGTCGAGAGGTCGATGTTGTCGTTGACGCATACGAGTGTCTTGTCGT 28879 || || | ||| || || ||||||||||||||| |||||||| | |||||||| | Sbjct 73 GCCGCCCTACCCAGGTTGATAGGTCGATGTTGTCGGACACGCATACCAACGTCTTGTCAT 14 Query 28880 GATCCATCACCCA 28892 |||| || ||| Sbjct 13 TGTCCAACATCCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 168211944855104