Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_022066.1
Length=108297
Score E
Sequences producing significant alignments: (Bits) Value
seq7279 212 4e-50
>seq7279
Length=10654
Score = 212 bits (234), Expect = 4e-50
Identities = 334/470 (71%), Gaps = 9/470 (2%)
Strand=Plus/Plus
Query 38437 GACCCGTTCTGGCCGGGTAACCGGGATAAGGCCCGCGCCGCCGGCCTGATCCTGGCGGGC 38496
||| | || ||||||||| ||| | ||||| | | |||||| | |||||||||
Sbjct 7534 GACGCCTTATGGCCGGGTTTCCGCGCCCAGGCCGGGGAGCAAGGCCTGCTGCTGGCGGGC 7593
Query 38497 TATCACTACGTCCGCACGGGCGAC--CCTGCT-GCGCAGGCAAAAACCTTCGTGGAGCAC 38553
|| |||||| ||||| | | |||| || || | |||||| | |||||||||| ||||
Sbjct 7594 TACCACTACATCCGCGCCGACGACGACCCGCGCGAGCAGGCCGAGACCTTCGTGGGGCAC 7653
Query 38554 CTGGGGGATAAGTCCATCCCCGCCATGTTGGATTTTGAGGACGGCTCGGGGAACATCGAG 38613
|| | || | | | ||||| ||| | ||||| ||||||||||| ||| | ||||
Sbjct 7654 CTCGCCGACCTGACGACGCCCGCGATGCTCGATTTCGAGGACGGCTCCGGGGATATCGGC 7713
Query 38614 CAGTTCTGGGCGGTGAAGAACGAGATCGAAAAGCTCGGCGTCCAG-GTCCGCCTGTCCTA 38672
||||||||| ||| ||||||||||| ||||||| | || ||||| || |||||
Sbjct 7714 GTGTTCTGGGCCGTGCGCGACGAGATCGAAGCCCTCGGCG-CGAGCGTCCGGCTCTCCTA 7772
Query 38673 CATTCCTGACTGGTACTGGGAGCGCATCGGAAAGCCGGACCTGTCCAAGGTCCCTGGTCT 38732
||| || | ||||||||||||| ||||||| || ||| | | | ||| || ||
Sbjct 7773 CATCCCCGGCTGGTACTGGGAGAGCATCGGCTCCCCCGACATCACTGGAGCCCCCGGCCT 7832
Query 38733 GATCTCATCCGAATACGTCAGCGGAACCGGATACGCATCGGTGCTATATC--CGGGTAAT 38790
|| |||| ||||||| ||| |||| |||| || | || |||| | || |
Sbjct 7833 CGTCCAATCCCGCTACGTCACCGGCTCCGGCGACGCCTCCGCCCTCTATCAGCAAGT-GT 7891
Query 38791 TCAAGCAACTTCTGGAAAGCGTACGGCGGCCGGACGCCCGACGTCCTGCAATTCACCGAC 38850
| || | | | ||| | | ||||||||| || |||| |||||| ||||||||||||
Sbjct 7892 CCGAGGAGC-TGTGGGAGCCCTACGGCGGCGCGAGCCCCGTCGTCCTCCAATTCACCGAC 7950
Query 38851 AGGGCCCTTGTGGCTGGCAAGTCGGTCGACGCTAACGCTTTCCGGGGAAC 38900
| |||||||| || || || | ||||||| ||||| |||||||||||
Sbjct 7951 CGAGCCCTTGTCGCCGGGAACACCCTCGACGCCAACGCCTTCCGGGGAAC 8000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346339267276224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |