Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_022067.1
Length=109960
Score E
Sequences producing significant alignments: (Bits) Value
seq7279 203 2e-47
>seq7279
Length=10654
Score = 203 bits (224), Expect = 2e-47
Identities = 330/470 (70%), Gaps = 9/470 (2%)
Strand=Plus/Plus
Query 41270 GACCCGTTCTGGCCGGGTAACCGGGATAAGGCCCGCGCCGCCGGCCTGATCCTGGCGGGC 41329
||| | || ||||||||| ||| | ||||| | | |||||| | |||||||||
Sbjct 7534 GACGCCTTATGGCCGGGTTTCCGCGCCCAGGCCGGGGAGCAAGGCCTGCTGCTGGCGGGC 7593
Query 41330 TATCACTACGTCCGCACGGGGGAC--CCTGC-CGCTCAGGCAAAAACCTTCGTGGAGCAC 41386
|| |||||| ||||| | | ||| || || || ||||| | |||||||||| ||||
Sbjct 7594 TACCACTACATCCGCGCCGACGACGACCCGCGCGAGCAGGCCGAGACCTTCGTGGGGCAC 7653
Query 41387 CTGGGGGATAAGTCCATCCCCGCCATGTTGGATTTTGAGGACGGCTCCGGCAATATCGAC 41446
|| | || | | | ||||| ||| | ||||| |||||||||||||| |||||| |
Sbjct 7654 CTCGCCGACCTGACGACGCCCGCGATGCTCGATTTCGAGGACGGCTCCGGGGATATCGGC 7713
Query 41447 CAGTTCTGGGCGGTGAAGAACGAGATCGAAAAGCTCGGCGTTCAGGTCCGCCTCTCCTAC 41506
||||||||| ||| ||||||||||| ||||||| ||||| |||||||||
Sbjct 7714 GTGTTCTGGGCCGTGCGCGACGAGATCGAAGCCCTCGGCGCGAGCGTCCGGCTCTCCTAC 7773
Query 41507 ATACCGGATTGGTACCACGAACGCATCGGCAAGCCGGACCTGTCGAAGGTTCCGGGACTG 41566
|| || | |||||| || |||||||| || ||| | | | || || ||
Sbjct 7774 ATCCCCGGCTGGTACTGGGAGAGCATCGGCTCCCCCGACATCACTGGAGCCCCCGGCCTC 7833
Query 41567 ATCTCGTCCGAATACGTCAGCGGCACCGGCTACGCCTCGGTGCTTTACCCGGGCAA---C 41623
|| ||| ||||||| |||| ||||| ||||||| | || || | ||||
Sbjct 7834 GTCCAATCCCGCTACGTCACCGGCTCCGGCGACGCCTCCGCCCTCTATC--AGCAAGTGT 7891
Query 41624 AACAGCAACTTCTGGAAAGCGTACGGCGGCCGGACGCCCGACGTCCTGCAGTTCACCGAC 41683
|| | | | ||| | | ||||||||| || |||| |||||| || |||||||||
Sbjct 7892 CCGAGGAGC-TGTGGGAGCCCTACGGCGGCGCGAGCCCCGTCGTCCTCCAATTCACCGAC 7950
Query 41684 CGCGCCCTCGTGGCCGGCAAGTCGGTCGACGCCAACGCCTTCCGGGGAAC 41733
|| ||||| || ||||| || | |||||||||||||||||||||||||
Sbjct 7951 CGAGCCCTTGTCGCCGGGAACACCCTCGACGCCAACGCCTTCCGGGGAAC 8000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351659541080288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |