Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq7279 203 2e-47 >seq7279 Length=10654 Score = 203 bits (224), Expect = 2e-47 Identities = 330/470 (70%), Gaps = 9/470 (2%) Strand=Plus/Plus Query 41270 GACCCGTTCTGGCCGGGTAACCGGGATAAGGCCCGCGCCGCCGGCCTGATCCTGGCGGGC 41329 ||| | || ||||||||| ||| | ||||| | | |||||| | ||||||||| Sbjct 7534 GACGCCTTATGGCCGGGTTTCCGCGCCCAGGCCGGGGAGCAAGGCCTGCTGCTGGCGGGC 7593 Query 41330 TATCACTACGTCCGCACGGGGGAC--CCTGC-CGCTCAGGCAAAAACCTTCGTGGAGCAC 41386 || |||||| ||||| | | ||| || || || ||||| | |||||||||| |||| Sbjct 7594 TACCACTACATCCGCGCCGACGACGACCCGCGCGAGCAGGCCGAGACCTTCGTGGGGCAC 7653 Query 41387 CTGGGGGATAAGTCCATCCCCGCCATGTTGGATTTTGAGGACGGCTCCGGCAATATCGAC 41446 || | || | | | ||||| ||| | ||||| |||||||||||||| |||||| | Sbjct 7654 CTCGCCGACCTGACGACGCCCGCGATGCTCGATTTCGAGGACGGCTCCGGGGATATCGGC 7713 Query 41447 CAGTTCTGGGCGGTGAAGAACGAGATCGAAAAGCTCGGCGTTCAGGTCCGCCTCTCCTAC 41506 ||||||||| ||| ||||||||||| ||||||| ||||| ||||||||| Sbjct 7714 GTGTTCTGGGCCGTGCGCGACGAGATCGAAGCCCTCGGCGCGAGCGTCCGGCTCTCCTAC 7773 Query 41507 ATACCGGATTGGTACCACGAACGCATCGGCAAGCCGGACCTGTCGAAGGTTCCGGGACTG 41566 || || | |||||| || |||||||| || ||| | | | || || || Sbjct 7774 ATCCCCGGCTGGTACTGGGAGAGCATCGGCTCCCCCGACATCACTGGAGCCCCCGGCCTC 7833 Query 41567 ATCTCGTCCGAATACGTCAGCGGCACCGGCTACGCCTCGGTGCTTTACCCGGGCAA---C 41623 || ||| ||||||| |||| ||||| ||||||| | || || | |||| Sbjct 7834 GTCCAATCCCGCTACGTCACCGGCTCCGGCGACGCCTCCGCCCTCTATC--AGCAAGTGT 7891 Query 41624 AACAGCAACTTCTGGAAAGCGTACGGCGGCCGGACGCCCGACGTCCTGCAGTTCACCGAC 41683 || | | | ||| | | ||||||||| || |||| |||||| || ||||||||| Sbjct 7892 CCGAGGAGC-TGTGGGAGCCCTACGGCGGCGCGAGCCCCGTCGTCCTCCAATTCACCGAC 7950 Query 41684 CGCGCCCTCGTGGCCGGCAAGTCGGTCGACGCCAACGCCTTCCGGGGAAC 41733 || ||||| || ||||| || | ||||||||||||||||||||||||| Sbjct 7951 CGAGCCCTTGTCGCCGGGAACACCCTCGACGCCAACGCCTTCCGGGGAAC 8000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351659541080288