Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_023565.1 Length=51250 Score E Sequences producing significant alignments: (Bits) Value seq12266 104 8e-18 >seq12266 Length=386 Score = 104 bits (114), Expect = 8e-18 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 26109 GGCCCACCGGCCCACCTTCCGAGCTCCCTGAGCTTCTTGTGCGAGGCAGTCGTCCGCTCC 26168 || ||||||| |||||| || ||||| | ||||| | ||| | || ||||||| Sbjct 185 GGGCCACCGGTCCACCTGCCTAGCTCTTTTAGCTTTTGGTGGCTGCCACGGTTCCGCTCT 126 Query 26169 CGGATCGCCTCCAATTCACCCTCTGCGACCCCCGCGATGACGTTGGCGATCATGCGACCG 26228 ||||||||||||| || || || || || || ||||||||| | || | | || || Sbjct 125 CGGATCGCCTCCAGCTCGCCTTCGGCAACGCCAGCGATGACGCTTGCAACGAGCCGCCCT 66 Query 26229 ACCCACGTCCCAAGGTCCAGATTCTCCGACACGCAGACGAGCGTCTTGTCGTTGTCGATC 26288 ||||| || ||||| | || || |||||||| || | ||||||||| ||||| | | Sbjct 65 ACCCAGGTTGATAGGTCGATGTTGTCGGACACGCATACCAACGTCTTGTCATTGTCCAAC 6 Query 26289 ATCCA 26293 ||||| Sbjct 5 ATCCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163838607046912