Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_023697.1 Length=48420 Score E Sequences producing significant alignments: (Bits) Value seq18889 100 9e-17 >seq18889 Length=3144 Score = 100 bits (110), Expect = 9e-17 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 13740 GCGAATCAGGCGGCAACTGGCACATCAACACCGGCAACGGCTACTACGGCGGTCTGCAGT 13799 |||| || ||| ||||||| | ||||||||||| ||||||||| | ||||| ||||||| Sbjct 2466 GCGAGTCCGGCAACAACTGGAAGATCAACACCGGAAACGGCTACCAGGGCGGCCTGCAGT 2407 Query 13800 TCAAGCAGTCGAGCTGGGAGGCTGCGGGCGGCACCAACTACGCGCC-GCGCGCCGACCTC 13858 |||| | ||| | |||| | | |||||| | | ||||| || ||| || ||||| Sbjct 2406 TCAACCCGTCCACCTGGCTGTCCCACGGCGGCGGCCAGTACGCCCCTGCG-GCGAACCTC 2348 Query 13859 GCCACGCCGTACCAGCAGGCCCTGGTCGCCGAGAACCTGCTCGCGCAGCAGGGCCCCGGC 13918 || || | | |||||| | |||||||||| ||||||| ||||||| || Sbjct 2347 GCGACCCGCGAGCAGCAGATCGCCATCGCCGAGAAGGTGCTCGCCACCCAGGGCCGGGGA 2288 Query 13919 GCGTGGCCG 13927 || |||||| Sbjct 2287 GCCTGGCCG 2279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154784806024832