Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_023722.1 Length=59231 Score E Sequences producing significant alignments: (Bits) Value seq7279 100 1e-16 >seq7279 Length=10654 Score = 100 bits (110), Expect = 1e-16 Identities = 143/201 (71%), Gaps = 3/201 (1%) Strand=Plus/Plus Query 32979 CGTGATCGCGAAGGTCTCGGAGGGGTCCGGCTTCCGGGACCCCCAGTGGCCGGGGTTCCG 33038 |||| ||||||| ||| || || ||||| |||| |||| || |||||||| ||||| Sbjct 7497 CGTGTTCGCGAAAGTCAGCGAAGGATCCGGGTTCCAGGACGCCTTATGGCCGGGTTTCCG 7556 Query 33039 GGACAAGGCCCGCGAGGTCGGCCTCCCGGTCATGGGGTACCACTACATCCGCGGCGACGA 33098 | | ||||| | ||| ||||| | | | ||| |||||||||||||||| |||||| Sbjct 7557 CGCCCAGGCCGGGGAGCAAGGCCTGCTGCTGGCGGGCTACCACTACATCCGCGCCGACGA 7616 Query 33099 CATCGACCG---TCAGGCGGACGTCTTCGTCGAACACCTCGGGGACCGCTCCATCCCGGC 33155 | | || ||||| || |||||| | ||||||| |||| | | || || Sbjct 7617 CGACCCGCGCGAGCAGGCCGAGACCTTCGTGGGGCACCTCGCCGACCTGACGACGCCCGC 7676 Query 33156 GATGGTCGACGTCGAGGACGG 33176 |||| |||| |||||||||| Sbjct 7677 GATGCTCGATTTCGAGGACGG 7697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189371605618368