Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq19295 84.2 3e-11
>seq19295
Length=205138
Score = 84.2 bits (92), Expect = 3e-11
Identities = 275/424 (65%), Gaps = 10/424 (2%)
Strand=Plus/Plus
Query 168278 CCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAGAAG 168337
||||| |||||||| || | |||||| || | | ||| || | | |||| ||||||
Sbjct 36567 CCCGTGCCGATACCTTCAGCACCGTTAACTAAGATCATTGGAATAATAGGCAGATAGAAG 36626
Query 168338 TCTGGCTCAATGGGGCGACCATCGTCATCCAAATAGTTGAGAATTGGATCATCTCTCGGA 168397
|| || ||||| | ||| ||| | ||||||||| | |||||||| | |
Sbjct 36627 TCGGGTTCAATCTTCTGGTTATCATCAAAGAGATAGTTGAGCACGGGATCATCCGAAGTA 36686
Query 168398 TCAAAGATCTTTCGGGCATCTTTTGTGAGCTTTGTAAAGATATACCTCGTTTGAGACGCA 168457
||| | |||| || | |||| ||||| || || ||||| | | ||||||
Sbjct 36687 GGAAATAGACTTCGTGCCAATGGGCTGAGTTTTGTGAAAATGTACCTGGGT---GACGCA 36743
Query 168458 ---TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATA 168514
|| || |||||| || || ||||| || ||||| |||| || || |||||
Sbjct 36744 GAATCTTTGCCACCCTGCAGCCGAGTACCGAATTGACCGATGGGCTGCAGTAGGTTGATG 36803
Query 168515 TTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACT--T 168572
|| || |||| | | | | ||||| ||||| || |||| | || |||| |
Sbjct 36804 TTATTACTGCCCACGAAATTTTGGGCCAAGTTGACGAT--TGTCATCATTAGCGACTGTT 36861
Query 168573 CACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCT 168632
|||||||||| ||||| | | ||||| || || | || | ||| || ||||| | |
Sbjct 36862 CACCGTGGTGATACGCCGACATTTCTGCTACGGATCCAGCAAGCTGGGCAACTTTGACTT 36921
Query 168633 CATCCTTGAGATTCTTGTGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGAC 168692
| ||| ||| | | |||||| | | ||| ||||| || || || || ||||
Sbjct 36922 CTCGCTTATCGTTCCTCTTGAAGCAGGTGAACAATACCTTACGCTGTCCTGGTTTAAGAC 36981
Query 168693 CATC 168696
||||
Sbjct 36982 CATC 36985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583111718539520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |