Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_028668.1
Length=77779
Score E
Sequences producing significant alignments: (Bits) Value
seq12436 95.1 6e-15
>seq12436
Length=461
Score = 95.1 bits (104), Expect = 6e-15
Identities = 151/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 5638 CGATTCCGGTTGGTAATTCGTTCTGGTACCCGTGCCTCATGGAGTACGGAAACTTTTACG 5697
||||||| || | ||| | |||||||| ||| || |||||| | || ||| ||||
Sbjct 264 CGATTCCAGTGGATAACACCTTCTGGTATCCGATGCTGATGGAGAATGGTGACTACTACG 205
Query 5698 GGAAGAAGCTCCTGAATACGGCCTTCCAGCCGTGGTTCTTTTCGTTGCTCATCCACATGT 5757
| |||||| || |||| || ||| | |||||||| | || | ||| |||
Sbjct 204 GTCGGAAGCTTCTTCGGCCGGCGTTTCAGTCTTGGTTCTTCAGCATTCTTCTTCACTTGT 145
Query 5758 ACTCGAATCGATACTTTGAGCGATTTGGTGAGCCGGTCCCGGTTGCGCGTGCGCCTTATG 5817
| ||||| |||| |||||||| ||||||||||| ||||| | || || || | ||
Sbjct 144 TTGCCAATCGGTACTACGAGCGATTCGGTGAGCCGGTTCCGGTAGGACGCGCTCCGTTTG 85
Query 5818 ACGAAGAGATTGACGTCAACGGCACGCCGGTAAAGGG 5854
|||| ||||| | || |||||||||| |||||
Sbjct 84 ACGACGAGATCATTCTGGACAGCACGCCGGTCAAGGG 48
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 248706004526720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |