Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_028668.1 Length=77779 Score E Sequences producing significant alignments: (Bits) Value seq12436 95.1 6e-15 >seq12436 Length=461 Score = 95.1 bits (104), Expect = 6e-15 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 5638 CGATTCCGGTTGGTAATTCGTTCTGGTACCCGTGCCTCATGGAGTACGGAAACTTTTACG 5697 ||||||| || | ||| | |||||||| ||| || |||||| | || ||| |||| Sbjct 264 CGATTCCAGTGGATAACACCTTCTGGTATCCGATGCTGATGGAGAATGGTGACTACTACG 205 Query 5698 GGAAGAAGCTCCTGAATACGGCCTTCCAGCCGTGGTTCTTTTCGTTGCTCATCCACATGT 5757 | |||||| || |||| || ||| | |||||||| | || | ||| ||| Sbjct 204 GTCGGAAGCTTCTTCGGCCGGCGTTTCAGTCTTGGTTCTTCAGCATTCTTCTTCACTTGT 145 Query 5758 ACTCGAATCGATACTTTGAGCGATTTGGTGAGCCGGTCCCGGTTGCGCGTGCGCCTTATG 5817 | ||||| |||| |||||||| ||||||||||| ||||| | || || || | || Sbjct 144 TTGCCAATCGGTACTACGAGCGATTCGGTGAGCCGGTTCCGGTAGGACGCGCTCCGTTTG 85 Query 5818 ACGAAGAGATTGACGTCAACGGCACGCCGGTAAAGGG 5854 |||| ||||| | || |||||||||| ||||| Sbjct 84 ACGACGAGATCATTCTGGACAGCACGCCGGTCAAGGG 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248706004526720