Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_028673.1 Length=73419 Score E Sequences producing significant alignments: (Bits) Value seq12436 116 2e-21 >seq12436 Length=461 Score = 116 bits (128), Expect = 2e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 4151 TTCCCGTGGAGAACAGTCTCTGGTATCCACTCCTCATGGAGAATGGAAACTACAAGGGGC 4210 |||| ||||| |||| |||||||||| | || ||||||||||| ||||| | || | Sbjct 261 TTCCAGTGGATAACACCTTCTGGTATCCGATGCTGATGGAGAATGGTGACTACTACGGTC 202 Query 4211 GACAGCTTCTCCGAACCGCGTTCCAGCCCTGGTTCTTCAGCACGCTCATTCATCTGTACC 4270 | ||||||| || | ||||| ||| | ||||||||||||| || |||| ||| Sbjct 201 GGAAGCTTCTTCGGCCGGCGTTTCAGTCTTGGTTCTTCAGCATTCTTCTTCACTTGTTTG 142 Query 4271 AGAACAAGTACTTCGAGCGGTTCGGCGAGCCGGTCCCGATCGGTCGCGCCCCGTACAACG 4330 || ||||| |||||| ||||| |||||||| ||| | || ||||| |||| ||| Sbjct 141 CCAATCGGTACTACGAGCGATTCGGTGAGCCGGTTCCGGTAGGACGCGCTCCGTTTGACG 82 Query 4331 ACAAGGTCA 4339 || || ||| Sbjct 81 ACGAGATCA 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234757481504640