Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_028687.1 Length=51637 Score E Sequences producing significant alignments: (Bits) Value seq12266 111 5e-20 >seq12266 Length=386 Score = 111 bits (122), Expect = 5e-20 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 26485 CGGGCCCCCGGCCCACCTTCCCAGCTCCCTGAGCTTCTTGTGCGAGGCAGTCGTCCGCTC 26544 |||||| |||| |||||| || ||||| | ||||| | ||| | || ||||||| Sbjct 186 CGGGCCACCGGTCCACCTGCCTAGCTCTTTTAGCTTTTGGTGGCTGCCACGGTTCCGCTC 127 Query 26545 CCGGATCGCCTCCAACTCACCCTCTGCGACCCCCGCGATGACGTTGGCGATCATGCGACC 26604 ||||||||||||| ||| || || || || || ||||||||| | || | | || || Sbjct 126 TCGGATCGCCTCCAGCTCGCCTTCGGCAACGCCAGCGATGACGCTTGCAACGAGCCGCCC 67 Query 26605 GACCCACGTCCCGAGGTCCAGATTCTCCGACACGCAGACGAGCGTCTTGTCGTTGTCGAT 26664 ||||| || ||||| | || || |||||||| || | ||||||||| ||||| | Sbjct 66 TACCCAGGTTGATAGGTCGATGTTGTCGGACACGCATACCAACGTCTTGTCATTGTCCAA 7 Query 26665 CATCCA 26670 |||||| Sbjct 6 CATCCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165076706338624