Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_028778.1
Length=75626
Score E
Sequences producing significant alignments: (Bits) Value
seq19061 98.7 5e-16
>seq19061
Length=15585
Score = 98.7 bits (108), Expect = 5e-16
Identities = 193/282 (68%), Gaps = 5/282 (2%)
Strand=Plus/Minus
Query 55434 GGCAACCTCACCGCTGATCCGGAACTGAGGTTCTTGGACTCCGGCGTGGCGGTCGCTCAG 55493
|||||| | || || ||||| || ||| ||||| |||||| ||| ||||| |
Sbjct 14185 GGCAACTTGACGGCCGATCCCGAGCTGCGGTTCACACCGACCGGCGCGGCCGTCGCGAAC 14126
Query 55494 TTCTCGGTGGCGTCTACTCCCCGCAAGTTCAACAAGCAGACGAACGAGTGGGAGGACGGC 55553
||| | || ||||| || || || | ||| || ||||| ||||||||| ||||||||
Sbjct 14125 TTCACCGTCGCGTCGACGCCTCGGACCTTCGACCGTCAGACCAACGAGTGGAAGGACGGC 14066
Query 55554 GAAACCGTGTTCCTCCG-TACGTCGGTGTGGCGCGAGCTTGCAGAGGGCGCGGCTGAGAA 55612
||| | ||||| | || | | | | ||||||||| || ||| || ||| |||
Sbjct 14065 GAAGCGCTGTTCTTGCGCTGCAAC-ATCTGGCGCGAGGCCGCGGAGAACGTGGCCGAGTC 14007
Query 55613 CCTGCGTAAGGGTGACAACGTTGTCGTGATCGGCAACCTCAAGCAGCGCGCTTACGAGA- 55671
||| | ||| | ||| |||||| ||||| |||||||||||| | |||||||
Sbjct 14006 GCTGACCAGGGGCGCGCGCGTCATCGTGACCGGCAGGCTCAAGCAGCGCTCGTACGAGAC 13947
Query 55672 --AGGACGGCCAGACTCGCACCGTCTTTGAGATTGACGGCGA 55711
|| ||| ||| || |||||| | ||| | || | |||
Sbjct 13946 CCGCGAGGGCGAGAAGCGGACCGTCGTCGAGCTCGAAGTCGA 13905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 241818121483936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |