Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_028865.1
Length=76964
Score E
Sequences producing significant alignments: (Bits) Value
seq12436 84.2 1e-11
>seq12436
Length=461
Score = 84.2 bits (92), Expect = 1e-11
Identities = 134/189 (71%), Gaps = 4/189 (2%)
Strand=Plus/Minus
Query 4072 CCCGTGGAGAACAGCCTCTGGTACCCGCTCCTCATGGAGAACGGAAACCACAGGGGTCGG 4131
|| ||||| |||| | ||||||| ||| | || |||||||| || || || ||||||
Sbjct 259 CCAGTGGATAACACCTTCTGGTATCCGATGCTGATGGAGAATGGTGACTACTACGGTCGG 200
Query 4132 CAGCTGCTGCGCACCGCCTTCCAGCCCTGGTTCTTCAGCA-CCTTGATC-CATCTGTACC 4189
|||| || || | || || ||| | ||||||||||||| ||| || | | | | ||
Sbjct 199 AAGCTTCTTCGGCCGGCGTTTCAGTCTTGGTTCTTCAGCATTCTTCTTCACTTGTTTGCC 140
Query 4190 AGAACAAGTACTTCGAGCGGTTCGGCGAGCCGGTCCCCATTGGCCGGGCGCCTTACAACG 4249
|| ||||| |||||| ||||| |||||||| || | || || || || | |||
Sbjct 139 --AATCGGTACTACGAGCGATTCGGTGAGCCGGTTCCGGTAGGACGCGCTCCGTTTGACG 82
Query 4250 ACAAGGTCA 4258
|| || |||
Sbjct 81 ACGAGATCA 73
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 246098654466400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |