Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_028897.1 Length=49421 Score E Sequences producing significant alignments: (Bits) Value seq12266 89.7 2e-13 >seq12266 Length=386 Score = 89.7 bits (98), Expect = 2e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 24859 CCAGCGGCCAAGCTCACGTAGCTTCTTCTGAGAGCCCTTGGTCCGTTCCCGAATGGCCTC 24918 ||| | ||| ||||| |||||| | || ||| | |||| || || || ||||| Sbjct 174 CCACCTGCCTAGCTCTTTTAGCTTTTGGTGGCTGCCACGGTTCCGCTCTCGGATCGCCTC 115 Query 24919 CAGCTCCCCCTCTGCCACGCCAGCGATGACGTTGGCGATCATCCGACCGATCCACGTCGA 24978 |||||| || || || ||||||||||||||| | || | | ||| || | ||| || || Sbjct 114 CAGCTCGCCTTCGGCAACGCCAGCGATGACGCTTGCAACGAGCCGCCCTACCCAGGTTGA 55 Query 24979 CAGGTCCAGATTCTCCGACACGCAGACGAGGGTCTTGTCGTTCTCCA 25025 ||||| | || || |||||||| || | |||||||| || |||| Sbjct 54 TAGGTCGATGTTGTCGGACACGCATACCAACGTCTTGTCATTGTCCA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157987228223808