Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_028960.1 Length=50999 Score E Sequences producing significant alignments: (Bits) Value seq12266 107 6e-19 >seq12266 Length=386 Score = 107 bits (118), Expect = 6e-19 Identities = 119/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 25339 CCACCGGCCCACCGGCCAAGCTCCCGAAGCTTCCGCTGGGATGACAGAGT-CCGCTCCCT 25397 ||||||| ||||| ||| ||||| ||||| | ||| || || || |||||| | Sbjct 182 CCACCGGTCCACCTGCCTAGCTCTTTTAGCTTTTGGTGGC-TGCCACGGTTCCGCTCTCG 124 Query 25398 GATCGCCTCCAGCTCTCCCTCGGCAACACCTGCGATGACCGACGCCACGAGGCGTCCGAC 25457 ||||||||||||||| || |||||||| || |||||||| || ||||| || || || Sbjct 123 GATCGCCTCCAGCTCGCCTTCGGCAACGCCAGCGATGACGCTTGCAACGAGCCGCCCTAC 64 Query 25458 CCACGTCGACAGGTCGATGTTGTCGCTGACGCACAC 25493 ||| || || ||||||||||||||| ||||| || Sbjct 63 CCAGGTTGATAGGTCGATGTTGTCGGACACGCATAC 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163035602079936