Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_028972.1
Length=75167
Score E
Sequences producing significant alignments: (Bits) Value
seq12436 134 7e-27
>seq12436
Length=461
Score = 134 bits (148), Expect = 7e-27
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 5933 ATTCCGGTTGGAAACTCGTTCTGGTACCCCATGCTTATGGAGTATGGTGACTACTACGGC 5992
||||| || | ||| | |||||||| || ||||| |||||| ||||||||||||||||
Sbjct 262 ATTCCAGTGGATAACACCTTCTGGTATCCGATGCTGATGGAGAATGGTGACTACTACGGT 203
Query 5993 AAGAAGCTGCTTAATACCGCTTACCAGCCGTGGTTTTTCTCCCTGCTTATTCACATGTAC 6052
|||||| ||| | || | ||| | ||||| ||| | | ||| ||||| |||
Sbjct 202 CGGAAGCTTCTTCGGCCGGCGTTTCAGTCTTGGTTCTTCAGCATTCTTCTTCACTTGTTT 143
Query 6053 TCGAATCGCTACTTCGAGCGATTTGGTGAGCCGGTTCCGGTTGCTCGCGCGCCATACGAC 6112
| ||||| |||| ||||||||| ||||||||||||||||| | ||||| || | |||
Sbjct 142 GCCAATCGGTACTACGAGCGATTCGGTGAGCCGGTTCCGGTAGGACGCGCTCCGTTTGAC 83
Query 6113 GAGGAAATCGACGTCAACGGCAAGCCCGTTAAGGGCCAT 6151
|| || ||| | || ||| ||| || |||||| ||
Sbjct 82 GACGAGATCATTCTGGACAGCACGCCGGTCAAGGGCAAT 44
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 240349687523584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |