Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_029060.1
Length=76276
Score E
Sequences producing significant alignments: (Bits) Value
seq12436 131 8e-26
>seq12436
Length=461
Score = 131 bits (144), Expect = 8e-26
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 5873 ATTCCGGTCGGAAACTCGTTCTGGTATCCCATGCTTATGGAGTATGGCGACTACTACGGC 5932
||||| || | ||| | ||||||||||| ||||| |||||| |||| |||||||||||
Sbjct 262 ATTCCAGTGGATAACACCTTCTGGTATCCGATGCTGATGGAGAATGGTGACTACTACGGT 203
Query 5933 AAGAAGCTGCTTAATACTGCCTACCAGCCGTGGTTTTTCTCCCTGCTTATTCACATGTAC 5992
|||||| ||| | || | ||| | ||||| ||| | | ||| ||||| |||
Sbjct 202 CGGAAGCTTCTTCGGCCGGCGTTTCAGTCTTGGTTCTTCAGCATTCTTCTTCACTTGTTT 143
Query 5993 TCGAATCGCTACTTCGAGCGATTTGGTGAGCCGGTTCCGGTTGCTCGCGCACCTTACGAC 6052
| ||||| |||| ||||||||| ||||||||||||||||| | ||||| || | |||
Sbjct 142 GCCAATCGGTACTACGAGCGATTCGGTGAGCCGGTTCCGGTAGGACGCGCTCCGTTTGAC 83
Query 6053 GAGGAAATTGACGTTAACGGCAAGCCCGTCAAGGG 6087
|| || || | || ||| ||| ||||||||
Sbjct 82 GACGAGATCATTCTGGACAGCACGCCGGTCAAGGG 48
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 243897603127136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |