Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq7231 102 6e-17
>seq7231
Length=219762
Score = 102 bits (112), Expect = 6e-17
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGA---AAG 27845
|||||| |||||||||||||| ||||| || ||| || ||| |||| || || |||
Sbjct 93027 AATGCAGATTTTTGTGAAAACCCTTACGGGAAAAACAATAACACTTGAAGTTGAGCCAAG 92968
Query 27846 CACCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGA 27905
| | || || | || || ||| ||||| |||||||| || ||||| ||
Sbjct 92967 CGAC-ACCATTGAGAAC--GTAAAAGCGAAAATTCAAGACAAAGAGGGCATTCCGCCTGA 92911
Query 27906 GCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTA 27965
|| || || | || ||||| ||||||||| | || |||| |||| | || || ||
Sbjct 92910 CCAACAGCGTCTCATCTTTGCTGGAAAACAACTCGAGGACGGTCGCACGCTATCGGACTA 92851
Query 27966 CAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||| || || ||||| |||||| | || | ||| | ||||||||
Sbjct 92850 CAACATCCAGAAGGAAAGCACCTTGCATCTCGTGCTCCGTCTCCGTGGCGG 92800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355773715531296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |