Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq17800 102 7e-17 >seq17800 Length=133550 Score = 102 bits (112), Expect = 7e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||| | ||||||||| |||||||| || || | || || ||||||||| | Sbjct 12501 CGAAATGGCGCCACTGGAAGCCGTACACGGGGCCTAAATCGCCTTCTTCCCTGGCGGTAA 12560 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 | || |||||||||| || | ||||||||||| ||||| || ||||| || |||| Sbjct 12561 AACCAAGGCTGTCCAAAAATTCACGAGAACCGTTGGCATCCCAAATTTTTACTCCTTTCT 12620 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCT 30165 | || ||||| |||| ||| || || ||||| Sbjct 12621 CCGACAGCTCCTTGGCGTTGGTAGAGCCTCT 12651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406061980068928