Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_030901.1
Length=92618
Score E
Sequences producing significant alignments: (Bits) Value
seq19061 313 1e-80
>seq19061
Length=15585
Score = 313 bits (346), Expect = 1e-80
Identities = 297/377 (79%), Gaps = 3/377 (1%)
Strand=Plus/Minus
Query 70870 TGGCAAACGACACCGTGATCACCGTGATCGGAAATCTGACCGCCGATCCCGAACTGCGCT 70929
||||| ||||||||| ||||| ||| |||| || |||| ||||||||||| ||||| |
Sbjct 14214 TGGCAGGCGACACCGTCATCACTGTGGTCGGCAACTTGACGGCCGATCCCGAGCTGCGGT 14155
Query 70930 TCACCCCCTCGGGCGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCG 70989
|||| || | |||||| | ||||| |||||||||||||| || || ||| |||||
Sbjct 14154 TCACACCGACCGGCGCGGCCGTCGCGAACTTCACCGTCGCGTCGACGCCTCGGACCTTCG 14095
Query 70990 ACAAGCAGTCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGC 71049
|| ||| |||||||||||||||||| ||| ||||| ||| ||||||||||||||||||
Sbjct 14094 ACCGTCAGACCAACGAGTGGAAGGACGGCGAAGCGCTGTTCTTGCGCTGCAACATCTGGC 14035
Query 71050 GCGAGCCGGCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGG 71109
||||| | || |||||||| ||||||||||| ||| |||| |||||||||||| |
Sbjct 14034 GCGAGGCCGCGGAGAACGTGGCCGAGTCGCTGACCAGGGGCGCGCGCGTCATCGTGACCG 13975
Query 71110 GTCGCCTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGC 71169
| | |||||||||||| |||||||| || |||||||| ||||| ||| ||||||
Sbjct 13974 GCAGGCTCAAGCAGCGCTCGTACGAGACCCGCGAGGGCGAGAAGCGGACCGTCGTCGAGC 13915
Query 71170 TCGAGGTCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGCCCGCGTGGTCCGAACTC 71229
|||| ||||| |||||||| || | ||||| ||| ||||||| ||| ||| | |
Sbjct 13914 TCGAAGTCGACGAGATCGGGCCTTCCCTGCGCTACTCCACCGCGAAAGTGAACCG--CGC 13857
Query 71230 CGCGCAACGGCGGCGGT 71246
||||| ||||||||||
Sbjct 13856 CGCGC-GCGGCGGCGGT 13841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 296178970839712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |