Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_030901.1 Length=92618 Score E Sequences producing significant alignments: (Bits) Value seq19061 313 1e-80 >seq19061 Length=15585 Score = 313 bits (346), Expect = 1e-80 Identities = 297/377 (79%), Gaps = 3/377 (1%) Strand=Plus/Minus Query 70870 TGGCAAACGACACCGTGATCACCGTGATCGGAAATCTGACCGCCGATCCCGAACTGCGCT 70929 ||||| ||||||||| ||||| ||| |||| || |||| ||||||||||| ||||| | Sbjct 14214 TGGCAGGCGACACCGTCATCACTGTGGTCGGCAACTTGACGGCCGATCCCGAGCTGCGGT 14155 Query 70930 TCACCCCCTCGGGCGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCG 70989 |||| || | |||||| | ||||| |||||||||||||| || || ||| ||||| Sbjct 14154 TCACACCGACCGGCGCGGCCGTCGCGAACTTCACCGTCGCGTCGACGCCTCGGACCTTCG 14095 Query 70990 ACAAGCAGTCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGC 71049 || ||| |||||||||||||||||| ||| ||||| ||| |||||||||||||||||| Sbjct 14094 ACCGTCAGACCAACGAGTGGAAGGACGGCGAAGCGCTGTTCTTGCGCTGCAACATCTGGC 14035 Query 71050 GCGAGCCGGCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGG 71109 ||||| | || |||||||| ||||||||||| ||| |||| |||||||||||| | Sbjct 14034 GCGAGGCCGCGGAGAACGTGGCCGAGTCGCTGACCAGGGGCGCGCGCGTCATCGTGACCG 13975 Query 71110 GTCGCCTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGC 71169 | | |||||||||||| |||||||| || |||||||| ||||| ||| |||||| Sbjct 13974 GCAGGCTCAAGCAGCGCTCGTACGAGACCCGCGAGGGCGAGAAGCGGACCGTCGTCGAGC 13915 Query 71170 TCGAGGTCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGCCCGCGTGGTCCGAACTC 71229 |||| ||||| |||||||| || | ||||| ||| ||||||| ||| ||| | | Sbjct 13914 TCGAAGTCGACGAGATCGGGCCTTCCCTGCGCTACTCCACCGCGAAAGTGAACCG--CGC 13857 Query 71230 CGCGCAACGGCGGCGGT 71246 ||||| |||||||||| Sbjct 13856 CGCGC-GCGGCGGCGGT 13841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296178970839712