Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_030911.1
Length=45858
Score E
Sequences producing significant alignments: (Bits) Value
seq19061 302 1e-77
>seq19061
Length=15585
Score = 302 bits (334), Expect = 1e-77
Identities = 278/352 (79%), Gaps = 0/352 (0%)
Strand=Plus/Minus
Query 36171 ATGGCAGGCGAAACCATCATCACGGTAATCGGCAACCTGACAGCCGATCCGGAACTGCGG 36230
||||||||||| ||| ||||||| || |||||||| |||| |||||||| || ||||||
Sbjct 14215 ATGGCAGGCGACACCGTCATCACTGTGGTCGGCAACTTGACGGCCGATCCCGAGCTGCGG 14156
Query 36231 TTCACTCCGTCCGGCGCGGCGGTCGCGAACTTCACGGTCGCTTCGACTCCGCGACAGTTC 36290
||||| ||| |||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct 14155 TTCACACCGACCGGCGCGGCCGTCGCGAACTTCACCGTCGCGTCGACGCCTCGGACCTTC 14096
Query 36291 GACCGGGACGCGAACGAGTGGAAGGACGGCGATCCGCTGTTCATGCGCTGCAACCTGTGG 36350
||||| | | |||||||||||||||||||| |||||||| ||||||||||| | |||
Sbjct 14095 GACCGTCAGACCAACGAGTGGAAGGACGGCGAAGCGCTGTTCTTGCGCTGCAACATCTGG 14036
Query 36351 CGTGACGCGGCGGAGAACGTCACGGACTCGCTGTCGAAGGGGACTCGGGTCATCGTGCAG 36410
|| || || ||||||||||| | || |||||| | | ||| | || |||||||||
Sbjct 14035 CGCGAGGCCGCGGAGAACGTGGCCGAGTCGCTGACCAGGGGCGCGCGCGTCATCGTGACC 13976
Query 36411 GGCCGGCTGAAACAGCGGAGCTACGAGGACAAAGAGGGCGTCACGCGGACCATCGTCGAG 36470
||| |||| || ||||| |||||| | ||||||| | ||||||| ||||||||
Sbjct 13975 GGCAGGCTCAAGCAGCGCTCGTACGAGACCCGCGAGGGCGAGAAGCGGACCGTCGTCGAG 13916
Query 36471 CTGGAAGTGGACGAGATCGGTCCGTCCCTGAAGTACGCGACGGCGAACGTGA 36522
|| ||||| ||||||||||| || |||||| ||| | || ||||| ||||
Sbjct 13915 CTCGAAGTCGACGAGATCGGGCCTTCCCTGCGCTACTCCACCGCGAAAGTGA 13864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146588396760320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |