Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq19061 284 7e-72 >seq19061 Length=15585 Score = 284 bits (314), Expect = 7e-72 Identities = 272/346 (79%), Gaps = 7/346 (2%) Strand=Plus/Minus Query 69624 ATGGCAAATGACACCGTCATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGG 69683 |||||| |||||||||||||| || |||| ||| |||| ||||| ||||| || ||| Sbjct 14215 ATGGCAGGCGACACCGTCATCACTGTGGTCGGCAACTTGACGGCCGATCCCGAGCTGCGG 14156 Query 69684 TTCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTC 69743 ||||| || |||| || || |||||||||||||||||||||||||| || ||| |||| Sbjct 14155 TTCACACCGACCGGCGCGGCCGTCGCGAACTTCACCGTCGCGTCGACGCCTCGGACCTTC 14096 Query 69744 GACAAGCAGTCGAACGAGTGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGTCTGG 69803 ||| ||| | |||||||||||||| | ||| || || ||| ||||||||||| ||||| Sbjct 14095 GACCGTCAGACCAACGAGTGGAAGGACGGCGAAGCGCTGTTCTTGCGCTGCAACATCTGG 14036 Query 69804 CGCGAGTACGCCGAGAACGTGACTGAGTCGCT--CCAGAAGGGCGCCCGCGTCATCGTCC 69861 |||||| ||| ||||||||| | |||||||| |||| |||||| ||||||||||| Sbjct 14035 CGCGAGGCCGCGGAGAACGTGGCCGAGTCGCTGACCAG--GGGCGCGCGCGTCATCGTGA 13978 Query 69862 AGGGCAAGCTCAAGCAGCGGTCCTACGAGA---AGGATGGCCAGCCGCGCACCACCTTCG 69918 |||| |||||||||||| || ||||||| || ||| || ||| ||| | ||| Sbjct 13977 CCGGCAGGCTCAAGCAGCGCTCGTACGAGACCCGCGAGGGCGAGAAGCGGACCGTCGTCG 13918 Query 69919 AGCTCGAGGTTGAGGAGATCGGCCCCGCACTCCGGTACGCCACCGC 69964 ||||||| || || |||||||| || | || || ||| ||||||| Sbjct 13917 AGCTCGAAGTCGACGAGATCGGGCCTTCCCTGCGCTACTCCACCGC 13872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299247006064064