Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_030936.1
Length=93843
Score E
Sequences producing significant alignments: (Bits) Value
seq19061 322 3e-83
>seq19061
Length=15585
Score = 322 bits (356), Expect = 3e-83
Identities = 299/377 (79%), Gaps = 3/377 (1%)
Strand=Plus/Minus
Query 72299 TGGCAAACGACACCGTGATCACCGTGATCGGAAACCTGACCGCCGATCCCGAACTGCGCT 72358
||||| ||||||||| ||||| ||| |||| ||| |||| ||||||||||| ||||| |
Sbjct 14214 TGGCAGGCGACACCGTCATCACTGTGGTCGGCAACTTGACGGCCGATCCCGAGCTGCGGT 14155
Query 72359 TCACCCCCTCGGGTGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCCCGGTACTTCG 72418
|||| || | || ||| | ||||| |||||||||||||| || || ||| |||||
Sbjct 14154 TCACACCGACCGGCGCGGCCGTCGCGAACTTCACCGTCGCGTCGACGCCTCGGACCTTCG 14095
Query 72419 ACAAGCAGAGCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGC 72478
|| |||| ||||||||||||||||| ||| ||||| ||| ||||||||||||||||||
Sbjct 14094 ACCGTCAGACCAACGAGTGGAAGGACGGCGAAGCGCTGTTCTTGCGCTGCAACATCTGGC 14035
Query 72479 GCGAGCCGGCCGAGAACGTCGCCGAGTCGCTGACCAAGGGCATGCGCGTCATCGTCCAGG 72538
||||| | || |||||||| |||||||||||||||| |||| |||||||||||| |
Sbjct 14034 GCGAGGCCGCGGAGAACGTGGCCGAGTCGCTGACCAGGGGCGCGCGCGTCATCGTGACCG 13975
Query 72539 GACGCCTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGC 72598
| | |||||||||||| |||||||| || |||||||| ||||| ||| ||||||
Sbjct 13974 GCAGGCTCAAGCAGCGCTCGTACGAGACCCGCGAGGGCGAGAAGCGGACCGTCGTCGAGC 13915
Query 72599 TCGAGGTCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGCCCGCGTGGTCCGAACTC 72658
|||| ||||| |||||||| || | ||||| ||| ||||||| ||| ||| | |
Sbjct 13914 TCGAAGTCGACGAGATCGGGCCTTCCCTGCGCTACTCCACCGCGAAAGTGAACCG--CGC 13857
Query 72659 CGCGCAACGGCGGCGGT 72675
||||| ||||||||||
Sbjct 13856 CGCGC-GCGGCGGCGGT 13841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300097993936512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |