Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_031229.1 Length=76972 Score E Sequences producing significant alignments: (Bits) Value seq12436 116 2e-21 >seq12436 Length=461 Score = 116 bits (128), Expect = 2e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 9770 TGGTATCCGCTGCTCATGGAGAACGGAAACTACAAGGGACGCCAGCTACTTCGGACTGCG 9829 ||||||||| |||| |||||||| || ||||| | || || |||| |||||| | ||| Sbjct 241 TGGTATCCGATGCTGATGGAGAATGGTGACTACTACGGTCGGAAGCTTCTTCGGCCGGCG 182 Query 9830 TTTCAGCCGTGGTTCTTCAGCACTCTCATTCACCTGTACCAGAACAAGTACTTCGAACGG 9889 |||||| | ||||||||||||| ||| ||||| ||| || ||||| ||| || Sbjct 181 TTTCAGTCTTGGTTCTTCAGCATTCTTCTTCACTTGTTTGCCAATCGGTACTACGAGCGA 122 Query 9890 TTCGGCGAGCCGGTTCCCATTGGACGCGCGCC 9921 ||||| ||||||||||| | |||||||| || Sbjct 121 TTCGGTGAGCCGGTTCCGGTAGGACGCGCTCC 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 246124248086624