Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_031230.1
Length=98136
Score E
Sequences producing significant alignments: (Bits) Value
seq19061 127 1e-24
>seq19061
Length=15585
Score = 127 bits (140), Expect = 1e-24
Identities = 233/341 (68%), Gaps = 3/341 (1%)
Strand=Plus/Minus
Query 74554 GAGTTGAGGTTCACTCCGAGTGGGGTTGCGGTAGCCAATTTCACTGTGGTGTCAAATCCC 74613
||| || ||||||| |||| || | || || || || ||||| || | ||| | ||
Sbjct 14164 GAGCTGCGGTTCACACCGACCGGCGCGGCCGTCGCGAACTTCACCGTCGCGTCGACGCCT 14105
Query 74614 CGGAGATTCGACAAGCAAACGAATTCCTGGATTGACGAGGAGCCATGGTTCGTACGTTGC 74673
|||| |||||| || || || |||| |||| || | |||| | || |||
Sbjct 14104 CGGACCTTCGACCGTCAGACCAACGAGTGGAAGGACGGCGAAGCGCTGTTCTTGCGCTGC 14045
Query 74674 AACATCTGGCGTGACGCGGCCGAGAATGCCGCAGAGTCGCTTGACAAGGGCACTCGAGTG 74733
||||||||||| || || || ||||| | || |||||||| || |||| | || ||
Sbjct 14044 AACATCTGGCGCGAGGCCGCGGAGAACGTGGCCGAGTCGCTGACCAGGGGCGCGCGCGTC 13985
Query 74734 ATCGTCCAGGGGCGTCTCAAGTCCCGGTCATATACCACCAACGAAGGCGAGGATCGAACG 74793
||||| || | |||||| || || || ||| ||| |||||| | || ||
Sbjct 13984 ATCGTGACCGGCAGGCTCAAGCAGCGCTCGTACGAGACCCGCGAGGGCGAGAAGCGGACC 13925
Query 74794 GTCCTTGAGCTCGAGGTCGATGAGATCGGACCCTCGCTGCAGTGGGCCACTGCTAAGGTT 74853
||| | |||||||| ||||| |||||||| || || |||| | |||| || || ||
Sbjct 13924 GTCGTCGAGCTCGAAGTCGACGAGATCGGGCCTTCCCTGCGCTACTCCACCGCGAAAGTG 13865
Query 74854 CAGCGCACCGAACGAGGCGGCGGAAACCGAGGCGGAGGCGG 74894
| ||| ||| || |||||||| | | |||||||||||
Sbjct 13864 AACCGCGCCGCGCGCGGCGGCGGTA---GCGGCGGAGGCGG 13827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313832170389216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |