Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq13242 86.0 6e-12 >seq13242 Length=2670346 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/135 (75%), Gaps = 4/135 (3%) Strand=Plus/Minus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 ||||||||| ||| ||||||||| ||| || | ||||||||| ||||| |||| Sbjct 1010285 CTTCGTCTCGCGAGATGAGTTCGTTGCTAAAGGTGAGCCCTGGCATGACCCCTCGCTTCT 1010226 Query 16284 TTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAACAGATGCAAA 16341 | | |||||| ||||| ||||| || | | ||| ||| ||||||||||| | || || Sbjct 1010225 TCAGCCAGAAGATCGCTGCAAAACTGCCGCTGAA--GAAGATACCCTCAACCGCCGCGAA 1010168 Query 16342 AGCGATTAATCGTTC 16356 ||||||| ||||| Sbjct 1010167 CGCGATTACACGTTC 1010153 Score = 82.4 bits (90), Expect = 8e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| || ||||| || ||| |||||||| || || ||||||||||| || || || Sbjct 1009858 ATATAAGTTTCAATGAGCAAAGAATACATTTCAGAATGGATGTTCTCTATCGCGATTTGG 1009799 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || || ||||| || || || || || |||| || ||| |||| || || Sbjct 1009798 AAGCCGTAGAAACAACGTGCTTCGGCGATTTTCACCTCCTGACTGAATCTCTCAATTAGA 1009739 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 |||||||| ||||||||||| || || || || ||||| || || || || ||| Sbjct 1009738 TTCTCATTAACGATACCGTCGGAAGCGGCGAAGAATGCCAAGATATGAGAGATAAAGTAT 1009679 Query 16652 TTTTCGTC 16659 | ||||| Sbjct 1009678 CTCTCGTC 1009671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511329645848560