Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq13202 113 3e-20 >seq13202 Length=1347106 Score = 113 bits (124), Expect = 3e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| || || || || || |||| |||||| || ||||| ||||| || ||||| |||| Sbjct 1326170 CTTTGTACTCGGCGCCAAAGTGCCGCCACTGGAAGCCATAGACAGGCCCCAGATCACCTT 1326111 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | ||||| || || || || || || | | || |||||| | ||||||| Sbjct 1326110 CCTCTCTATCCGTGAAGCCGCACGAGTCCAAGAAAGCCCGCGAACCATTCTCGTCCCAAA 1326051 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACA 102212 |||| || || | | ||| |||||| || || |||||| ||||||||||||||| Sbjct 1326050 TGTGAACACCCTTATCCGTTAGTTCTTTGGAGTTCGTCGATCCTTTGATAAACCACAACA 1325991 Query 102213 GTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 |||| || || || | | ||| || || |||||||| || | | |||||| Sbjct 1325990 GTTCCTCGACCACCGCACGCCAGAACACCCTCTTAGTTGTAAGTAATGGAAA 1325939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361192828353758