Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq13202 114 9e-21 >seq13202 Length=1347106 Score = 114 bits (126), Expect = 9e-21 Identities = 177/250 (71%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 97381 TAAT-TGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAAC 97439 |||| ||||| | | | ||| || || || ||||| |||| ||| ||||| ||||| || Sbjct 1326186 TAATCTGTGCGCATGTCTTTG-TACTCGGCGCCAAAGTGCCGCCACTGGAAGCCATAGAC 1326128 Query 97440 AGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGA 97499 ||| || || || ||||| |||||||| ||| || | || || | | || || Sbjct 1326127 AGGCCCCAGATCACCTTCCTCTCTATCCGTGAAGCCGCACGAGTCCAAGAAAGCCCGCGA 1326068 Query 97500 TCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCC 97559 ||||| | ||||||||||| ||||| | | || |||||| || || ||||| Sbjct 1326067 ACCATTCTCGTCCCAAATGTGAACACCCTTATCCGTTAGTTCTTTGGAGTTCGTCGATCC 1326008 Query 97560 TCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAA 97619 | ||||||||||||||| ||| || || || | | ||| || || ||||||||||| | Sbjct 1326007 TTTGATAAACCACAACAGTTCCTCGACCACCGCACGCCAGAACACCCTCTTAGTTGTAAG 1325948 Query 97620 GAGAGGAAAA 97629 | |||||| Sbjct 1325947 TAATGGAAAA 1325938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346727965991060