Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq13163 134 1e-26 seq13245 111 1e-19 seq13189 84.2 2e-11 >seq13163 Length=1194233 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 |||||||| | || ||| || ||||||| ||||| || ||||| || || || ||| Sbjct 709827 CCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAA 709886 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| | || || |||||||| |||||| |||| | |||||||||||| ||||| Sbjct 709887 AGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGA 709946 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690 || ||||| ||||| ||||| || || | ||| | |||||| | ||| ||||| Sbjct 709947 ATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCT-TCGAC 710005 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| ||| | |||||||| || ||||| ||||| || |||||||| Sbjct 710006 TTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053 >seq13245 Length=2836997 Score = 111 bits (122), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTA 118606 |||| || |||||||| ||| | |||| |||| |||||| |||||||| || ||| | Sbjct 675195 CTTTCTGTATGTTGTAGTCGG--AGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAA 675138 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 |||||| ||||||||||| || || |||||||||||||| || || || || | Sbjct 675137 GATGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 675078 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| || || | ||| ||||||| ||| | || ||||| || || || || || Sbjct 675077 CTCGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 675018 Query 118727 AAAAATCTGCATGG 118740 || |||||||||| Sbjct 675017 GAAGATCTGCATGG 675004 >seq13189 Length=1149699 Score = 84.2 bits (92), Expect = 2e-11 Identities = 192/280 (69%), Gaps = 7/280 (3%) Strand=Plus/Minus Query 133692 GGATAGTGGTTGACGTCGATGATCTTGTTGAGATTGCGGACGATAATTTTAGTCAAATGT 133751 |||||| || |||||||||| || | ||||||||| || ||||| | | | ||| Sbjct 401834 GGATAGAAATTTACGTCGATGACTTTATCTAGATTGCGGGTGACGATTTTTG-CGACTGT 401776 Query 133752 -TTCAGCAAAACATAGTCAAATGTCTTGGCGTCGACGTCGACGCACTTGTTGACGGCAAT 133810 || || | || | || || || |||||||| ||| |||| || ||||||| || || Sbjct 401775 CTTAAGTTTATCAAAATCGAAAGTTTTGGCGTCTGCGTTGACGAACATGTTGACAGCGAT 401716 Query 133811 ACTGGCTAGATTACAAACGGCCGTCTCGTTCTCGTC-GCAATACTGGACGATCTCGGCGC 133869 | |||| ||| || ||||| ||| | | | | | |||| || | | ||||| || Sbjct 401715 AGACGCTAAATTGCATACGGCGACCTC-TCCGGGACCGGAATATTGAATAACCTCGGTGC 401657 Query 133870 AGAGGTTGCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAGT-TATTGCAATGA 133928 | | |||||||||||||| ||||| | | | ||||| | | | ||| || || Sbjct 401656 ACAAATTGCTGCATTTGATAGTGCCTACGTGCTGATGATT-CGATTTTCGATTACAGTGG 401598 Query 133929 TCCTTGTATAGCATGTACGGCCCGCCGGTTTCGACGTTGG 133968 || ||||| ||||| || ||| || ||||| || |||| Sbjct 401597 TCTTTGTAAAGCATATAAGGCGTTCCAGTTTCCAC-TTGG 401559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433760300870536