Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq13240 84.2 4e-11 >seq13240 Length=2589821 Score = 84.2 bits (92), Expect = 4e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 52078 AATTCTTTTATCCATGTTATTATGTACACTTATTATGGTATGGCCGCTTGTGGTCCTATG 52137 |||||| | ||||| |||||||||||| |||||| |||| || ||| |||||||| | Sbjct 2526971 AATTCTATAGTCCATATTATTATGTACAGTTATTACTGTATTGCGGCTCTTGGTCCTAAG 2527030 Query 52138 TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTATAATGCAGTTGGTA 52188 | |||||| || || ||||||||| ||| | ||| || ||| ||||| Sbjct 2527031 TACAGAAAATACCTCTGGTGGAAAAAATATATGACTTGGATTCAGCTGGTA 2527081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923043803210320