Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq13163 98.7 1e-15 >seq13163 Length=1194233 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 |||| ||| | |||||||| || || || || || ||||| ||||||| || || Sbjct 711791 ACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTGCCGTCTTCC 711850 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | ||| || |||||||| |||| | |||||||||||||||||| |||||||||||||| Sbjct 711851 AGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGAATACCTTCTTTATCTTG 711909 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || || | ||||| || || || || | |||||||| || |||||||| || ||| Sbjct 709827 CCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAA 709886 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||||| || || | ||||| ||||| || || || | ||||||||||||||| Sbjct 709887 AGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGA 709946 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| || || Sbjct 709947 ATTCCCTCTTTGTCCTG 709963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743403179087360