Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq13241 105 1e-17 >seq13241 Length=2617568 Score = 105 bits (116), Expect = 1e-17 Identities = 130/178 (73%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 |||||||| |||||| || | || |||||||||||||||| ||||| | || |||||| Sbjct 1865625 TGTCCGCCATTCAAGATCATCATACTGGACGAGGCGGACAGTATGACCGGCGCCGCGCAA 1865684 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 | || ||||| |||| || |||| | || ||||| || ||| |||||||| Sbjct 1865685 ACGGCGCTCCGTCGAATCATAGAGAAAGAGTCGCACAGCACGCGCTTCTGCTTGGTGTGC 1865744 Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || ||| ||||| ||||||| ||| | || || || ||| |||| || || |||| Sbjct 1865745 AATTACCTGTCGCGGATCATCAAGCCGATAGCGTCGCGCTGCACCAAATTCCGGTTCA 1865802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073584001314944