Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq13163 107 1e-18 >seq13163 Length=1194233 Score = 107 bits (118), Expect = 1e-18 Identities = 168/238 (71%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| || || | || |||| ||||| || ||||| || || ||||||||||||| Sbjct 711772 TCCTCCGCGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGA 711831 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| | | ||||||| ||| ||||| ||| |||| || | ||| |||||| || Sbjct 711832 AAGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGG 711891 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||| ||||| || | | || ||||| | | ||| ||||||| | || Sbjct 711892 AATACCTTCTTTATCTTGGATCT-TAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTA 711950 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAACT 18334 || | ||||||| |||| || || | ||||| ||||| |||||||| || || || Sbjct 711951 CCTCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATGTTGAATCT 712008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379282704885210