Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq13189 86.0 8e-12 >seq13189 Length=1149699 Score = 86.0 bits (94), Expect = 8e-12 Identities = 101/133 (76%), Gaps = 3/133 (2%) Strand=Plus/Minus Query 63176 AGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGG 63235 |||||||| | ||| || || || |||||||||| | |||| | ||| |||| | || Sbjct 401367 AGTATACAGTGTTTCAAATTCCTCGCCCCAAACATCGGCCAAGCCGGGAGATTCGTATGG 401308 Query 63236 ACACATCAACGACCAC-TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCC 63294 ||||||||| |||| |||| ||||| | || ||||||||||| ||||| || |||| Sbjct 401307 ACACATCAAACTCCACATCTC-GTCATTATGCATACGTTTCATAAAAAGATCCGGTATCC 401249 Query 63295 AAAGAGCTATAAA 63307 | || || ||||| Sbjct 401248 AGAG-GCCATAAA 401237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629713223478240