Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq12852 450 4e-122 >seq12852 Length=38369 Score = 450 bits (498), Expect = 4e-122 Identities = 483/639 (76%), Gaps = 0/639 (0%) Strand=Plus/Plus Query 2616 TCAGCTTCGGCCTGGGCTTTTGTGCGAATCGCATCAGCCTGTCCGGCAGCTTCTGCGCGC 2675 |||||||| || | |||||| | ||||| | ||||| | || | || | || || Sbjct 36474 TCAGCTTCTGCTTTGGCTTTCTTACGAATAACGTCAGCTTCACCATCTGCCTGAGCACGA 36533 Query 2676 AACATATTGGCTTCCGCTTCGCGCTGTTTTACTTCCTGCTCGCGCTGCAGTGTTTTCTGG 2735 ||| | ||||| ||||| || || || ||||||||||| ||||| ||||| | ||| Sbjct 36534 GCCATCTGTGCTTCTGCTTCACGTTGCTTCACTTCCTGCTCACGCTGAAGTGTAGTTTGG 36593 Query 2736 TTCGCCGTGACTTTGGCATTAATGCTGTCGATAACGGTTGGCGGGTACTCCGGCTTACCC 2795 || || || ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct 36594 TTTGCAGTCACTTTAGCATTGATGCTATCGATTACAGTCGGCGGGTATTCTGGCTTACCC 36653 Query 2796 ACATATGAGAGGCTCATTACCTGAATACCGATAGGTGTCATCTCTGCCTGAATGTCTTTA 2855 | ||| || | ||||||||| | ||||| | || |||||||| |||||| || | Sbjct 36654 ATATAGGACAAGCTCATTACTTCGATACCAACCGGAGTCATCTCATGCTGAATATCAGCA 36713 Query 2856 AGAGCTTCATCCAGCAGCTCAGACTTGCCGCCGTCGATAAATTTGTCAGTGGTCATTTTG 2915 |||||||| ||||||| | ||||| || ||||| ||| |||| || | ||| | Sbjct 36714 AGAGCTTCTGCCAGCAGAGTTGCTTTGCCACCATCGATGAATCTGTCCGTAGACATACGG 36773 Query 2916 CTGGCCAGTCGGTTGAGTGCGTCGGCGATCTTCTGGCGCAGGTCAGTGTCGGTAATGTCA 2975 |||| || || || ||| || || ||||| |||||||| |||||||||||| Sbjct 36774 GAAGCCAAACGATTCAGGCTGTCAGCAATTTTCTGCTTGAGGTCAGTATCGGTAATGTCA 36833 Query 2976 TCCACGCCTTTGCGGTAGGTCTGAAACACCGTGGTAACTTTGGATGGATCAACTTTGTAG 3035 || ||||| || || || ||||| ||||| || | || |||| |||| || |||||| Sbjct 36834 TCAACGCCCTTACGATACGTCTGGAACACAGTAGCTACCTTGGTAGGATTTACCTTGTAG 36893 Query 3036 GCCACGCCAATGTGATAGCCGATGGTTGTACCGTCACTCATCTGGAAACTGAACGGTTCA 3095 | || ||||||||||| ||||| |||||||| || ||||||||||| ||||||| || Sbjct 36894 GTAACACCAATGTGATAACCGATAGTTGTACCATCGCTCATCTGGAAGTTGAACGGGTCG 36953 Query 3096 TCGTAGGTCTTCATTTGTTTGAAGGTGGGGAAGATATAAACTTCAGTATTCCAGCCAGTC 3155 || || | ||||||||| |||||||| |||||| |||| ||||| ||||||||||||||| Sbjct 36954 TCATACGACTTCATTTGCTTGAAGGTAGGGAAGCTATATACTTCCGTATTCCAGCCAGTC 37013 Query 3156 CAGTAGCGACCAACACCGACCACCTCACCGACGCCTTTGTCGTCGCCCAGTTTATTTACC 3215 |||||||| || |||||||| || || || || ||||| || || || ||||| || || Sbjct 37014 CAGTAGCGGCCTACACCGACTACTTCTCCAACACCTTTATCATCCCCGAGTTTGTTGACT 37073 Query 3216 TTGATGCCAACATTACCTGGTTCAACGCGATCGCAACCG 3254 || |||||||| ||||| ||||| || || || |||||| Sbjct 37074 TTAATGCCAACGTTACCCGGTTCGACACGGTCACAACCG 37112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136096969689252