Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq13202 95.1 1e-14 >seq13202 Length=1347106 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 21280 TGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGC 21339 ||||||| || ||||| || | ||||||||| || || || ||||||||||| || || Sbjct 1326167 TGTACTCGGCGCCAAAGTGCCGCCACTGGAAGCCATAGACAGGCCCCAGATCACCTTCCT 1326108 Query 21340 GGCGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTT 21399 | ||| |||||| || |||| || || || || || | | |||||||||| | Sbjct 1326107 CTCTATCCGTGAAGCCGCACGAGTCCAAGAAAGCCCGCGAACCATTCTCGTCCCAAATGT 1326048 Query 21400 TTACGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACT 21459 || || || ||||| |||||| || || || |||||||||||| || | Sbjct 1326047 GAACACCCTTATCCGTTAGTTCTTTGGAGTTCGTCGATCCTTTGATAAACCACAACAGTT 1325988 Query 21460 CCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGT 21496 |||| || || | | ||| |||||||| || || || Sbjct 1325987 CCTCGACCACCGCACGCCAGAACACCCTCTTAGTTGT 1325951 Score = 86.0 bits (94), Expect = 5e-12 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||| || || || |||||||||| || |||| |||| || ||| |||||||| | Sbjct 1326552 TCAGTCCGGTAACATGAGCGATCATGTAGATCAGCAGGGAATACGAGGCTATGTTAAATG 1326493 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || || |||||||| ||| ||||| || ||||| ||||| || || Sbjct 1326492 GCACTCCTAGACCCATGTCCGCGCTTCTCTGATAAAGCTGCGCGGACAATTCTCCGTTGT 1326433 Query 21109 CCACGTAAAACTGACACAAAA-CGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCG 21167 |||||||||||| ||||||| |||| || || || | |||||| || | || Sbjct 1326432 TCACGTAAAACTG-CACAAAAGCGTGGCACGGTGGCAATGCCATCTTCGGAATATCAATC 1326374 Query 21168 GGGTTCCACGCGCACATAACGATGCG 21193 || ||||| || |||| | |||||| Sbjct 1326373 GGATTCCAGGCTGACATGATGATGCG 1326348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427706879151840