Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq13242 84.2 2e-11 >seq13242 Length=2670346 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 13908 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 13967 || ||||||||| | ||||| || || ||||| || || |||||||||||| || Sbjct 1009880 TTACTTCTCTTTCGCGTCAGAAATATAAGTTTCAATGAGCAAAGAATACATTTCAGAATG 1009821 Query 13968 TATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT-ACCT 14026 ||||| ||||| || || || || || || ||||| | ||||| | | ||| | |||| Sbjct 1009820 GATGTTCTCTATCGCGATTTGGAAGCCGTAGAAACAACGTGCTTC-GGCGATTTTCACCT 1009762 Query 14027 CC-GAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAAT 14085 || || | ||||| || | || |||||||| ||||| || ||| || || ||| Sbjct 1009761 CCTGACT-GAATCTCTCAATTAGATTCTCATTAACGATACCGTCGGAAGCGGCGAAGAAT 1009703 Query 14086 GCCAATATGTTTTTAATAAAGTATTGCTCTTC 14117 ||||| || | ||||||||| ||| || Sbjct 1009702 GCCAAGATATGAGAGATAAAGTATCTCTCGTC 1009671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478509485871120