Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq13163 102 6e-17 >seq13163 Length=1194233 Score = 102 bits (112), Expect = 6e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 ||||| || | ||||| ||||| | || | |||| |||| ||| ||||| ||||| Sbjct 711809 TCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAG 711868 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 |||| || || ||||| | || | ||||||||| || |||| ||||||| | Sbjct 711869 ATCAGACGTTGCTGATCCGGAGGAATACCTTCTTTATCTTGGATCTTAGCTTTGACATTT 711928 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| ||||| ||| || || || | || || |||||||| || |||||||||||| Sbjct 711929 TCAATAGTGTCAGAAGCTTCTACCTCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACA 711988 Query 43099 AAAATTTGCATTTT 43112 || |||||||| || Sbjct 711989 AAGATTTGCATGTT 712002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381307977584964