Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq13189 96.9 5e-15 >seq13189 Length=1149699 Score = 96.9 bits (106), Expect = 5e-15 Identities = 217/319 (68%), Gaps = 14/319 (4%) Strand=Plus/Minus Query 71544 ACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAAT 71603 ||| |||||||||||||| | |||||| ||| | ||| | |||||||| |||| | Sbjct 401880 ACCAATAGGTCTGTGTCTTTGATTAGATGTTTTCGTCTCTTGGATAGGATAGAAATTTAC 401821 Query 71604 ATCTATAATTTTATTGAGATTTC---TGACTATTACTTTGACCACATCCTTTAGTTTGAG 71660 || || | ||||| ||||| | |||| ||| |||| | || ||| ||||| Sbjct 401820 GTCGATGACTTTATCTAGATTGCGGGTGACGATT--TTTG-CGACTGTCTTAAGTTTATC 401764 Query 71661 AAAATCAAA---TCTCCCATCT---ATTACAAACACGTTCAAGGCAACAGATGCCAGATT 71714 |||||| || | | | ||| | || |||| ||| | || | ||| || | ||| Sbjct 401763 AAAATCGAAAGTTTTGGCGTCTGCGTTGACGAACATGTTGACAGCGATAGACGCTAAATT 401704 Query 71715 ACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACA 71774 || ||||| ||||| | | ||| |||||| |||| || ||||| | ||| || || Sbjct 401703 GCATACGGCGACCTCTCCGGGACCGGAATATTGAATAACCTCGGTGCACAAATTGCTGCA 401644 Query 71775 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG-TTACACGCATCCTTATAAAGAA 71833 ||||| || |||| | || ||||| | |||| | ||||| || || ||||| | Sbjct 401643 TTTGATAGTGCCTACGTGCTGATGATT-CGATTTTCGATTACAGTGGTCTTTGTAAAGCA 401585 Query 71834 TAAACGGAGTACCAGTTTC 71852 || | || || |||||||| Sbjct 401584 TATAAGGCGTTCCAGTTTC 401566 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/191 (70%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 71081 TTTTG-ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 71139 ||||| || || || | |||||| ||| |||| || ||| | || || ||||| Sbjct 402482 TTTTGCATATCCTCGTCCCATAAAGCTCTGGCGGTCAAGTCTCGCAATAGGTGGGGATTG 402423 Query 71140 ACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCC 71199 || | |||||||||||||||||| | | ||| |||||| | || || ||||| Sbjct 402422 ACAATGACAAATTCTCCAGACAATACGCGTCTCACGTAGATATTAGTCGTGTAGGGTTCA 402363 Query 71200 ACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAAT 71259 | ||||| ||||| || ||||| || || || || || || |||||||| || | || Sbjct 402362 ATGGACTCGTTATTCCCTAAAATCTGTGCCGTCGAGGCTGTTGGCATAGGCGCTATTAAA 402303 Query 71260 AGACTATTTCT 71270 ||| |||||| Sbjct 402302 AGAGAATTTCT 402292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671027975456080