Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq13163 116 4e-21
seq13242 86.0 6e-12
>seq13163
Length=1194233
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||| || | ||||| || | ||||| |||||||| || || |||||||| |||
Sbjct 711773 CCTCCGCGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGAA 711832
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || |||||| ||||| || |||||| ||||||||||||||||||| |||||
Sbjct 711833 AGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGA 711892
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| |||||||| || || || ||| | | ||| | ||||| | | ||||||
Sbjct 711893 ATACCTTCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTACC 711952
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | || || || || | ||||| || || ||||||||
Sbjct 711953 TCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 711999
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
|||||| || | ||||||||||| || | |||||||| ||||| || || || |||
Sbjct 709826 GCCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGA 709885
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
| || || |||||| || ||||| ||||| |||| | ||| |||||||| |||||
Sbjct 709886 AAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGG 709945
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| || |||||||| ||||| || | | ||| | ||||| | | ||| ||
Sbjct 709946 AATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGAC 710005
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||| | || | || ||||| || | || |||||||| || |||||
Sbjct 710006 TTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053
>seq13242
Length=2670346
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 50316 AGACTTAATACTCAACGCTTTCGATAATATTTCGTGTGTGCGTAAAAAGGACGATTGGGC 50375
|||||| || | || || |||| | || | |||||| | || |||| | |||||||
Sbjct 1010056 AGACTTCTTATTTAATGCGATCGAGACGCTTCCTTGTGTGGGAAAGAAGGCCAATTGGGC 1010115
Query 50376 ATTGAAATGGACTaaaaacaaaaaaCTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCAT 50435
|||||| |||| || || | | ||| || | |||||| || | ||||| ||
Sbjct 1010116 ATTGAACTGGATCAATCACGAGAGCGCTACATTTCCTGAACGTGTAATCGCGTTCGCGGC 1010175
Query 50436 AGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGG 50495
||||| ||| | || || ||| || |||||||| || || | | || | |||
Sbjct 1010176 GGTTGAGGGTATCTTCTTCAGCGGCAGTTTTGCAGCGATCTTCTGGCTGAAGAAGCGAGG 1010235
Query 50496 CATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAG 50545
| ||||| || ||||| ||||||||||| | || ||||| |||||||
Sbjct 1010236 GGTCATGCCAGGGCTCACCTTTAGCAACGAACTCATCTCGCGAGACGAAG 1010285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506930375038560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |