Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq13202 111 2e-19 >seq13202 Length=1347106 Score = 111 bits (122), Expect = 2e-19 Identities = 162/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 69936 TCGAGGAGCTCTTGTGGATGATTTCCGGATCGACCAATGCCAAAGAGCTGAGCCGA-AAG 69994 ||||||| || |||||| | || |||||||| || ||||||| || | | || ||| Sbjct 1325982 TCGAGGAACTGTTGTGGTTTATCAAAGGATCGACGAACTCCAAAGAACTAA-CGGATAAG 1326040 Query 69995 GGTGTACACATTTGGAGCGGCAACAGTAGTCGAAGCGTT-TTGGATTCGCTCGGCTTCAC 70053 ||||| ||||||||| || || || || || || ||||| ||| ||||||||| Sbjct 1326041 GGTGTTCACATTTGGGACGAGAATGGTTCGCGG-GCTTTCTTGGACTCGTGCGGCTTCAC 1326099 Query 70054 CGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCAC 70113 || ||| | || || ||||||||||| || || || ||||||||| |||||| ||| | Sbjct 1326100 GGATAGAGAGGAAGGTGATCTGGGGCCTGTCTATGGCTTCCAGTGGCGGCACTTTGGCGC 1326159 Query 70114 CAAGTATGTAGAC-TGCGAGACAGACTATTCGGGTCAGGGT 70153 | |||| |||| |||| ||||| || |||| || ||| Sbjct 1326160 CGAGTACAAAGACATGCG-CACAGATTACACGGGACAAGGT 1326199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740936387964080