Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq13096 93.3 3e-14 seq13163 82.4 6e-11 >seq13096 Length=514919 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || ||||||| | | ||||| |||||| || || ||||||||||| ||||| |||| | Sbjct 6544 CCACCTCGCAGGCGCAGCACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCCGAC 6485 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCC 18928 | ||| || ||||||||| ||| ||||| || | || || |||||||||||| Sbjct 6484 AAAGTTCTGCCGTCCTCCAACTGCTTACCGGCGAAGATCAGCCTCTGCTGATCC 6431 >seq13163 Length=1194233 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 18830 AACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC 18889 || || | ||| | |||||| |||||||| ||||| || || | | ||| || |||| Sbjct 709842 AAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAAAGAGTTCTGCCGTCT 709901 Query 18890 TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCG 18949 ||||||||||| || || | || | | |||||||||| || | ||||||||||| Sbjct 709902 TCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCC 709961 Query 18950 GCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTT 19009 ||||| || || | | | || ||| || || ||||| ||| |||||| Sbjct 709962 TGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTT 710021 Query 19010 TTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || || || | ||| || || || || |||||| Sbjct 710022 TTGCCCGTGAGAGTCTTTACGAAGATCTGCATT 710054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414505812549652