Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq13163 86.0 4e-12 >seq13163 Length=1194233 Score = 86.0 bits (94), Expect = 4e-12 Identities = 152/220 (69%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTG- 33213 |||| |||| ||| | || || || || || || ||||| || || || | || Sbjct 711785 CGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGA--AAGGGTTCTGC 711842 Query 33214 -GTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTT 33272 ||| |||| |||||| ||| ||| || | ||||||||| |||| || || ||||||| Sbjct 711843 CGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGAATACCTTCTT 711902 Query 33273 TTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTA 33332 | || ||| ||| || ||| ||| ||||| | || || || || || | Sbjct 711903 TATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTACCTCGAGGGTGA 711962 Query 33333 TCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 | |||||||| || |||||||| || || ||||||||||| Sbjct 711963 TGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATGTT 712002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318726091317684