Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq13163 98.7 7e-16 >seq13163 Length=1194233 Score = 98.7 bits (108), Expect = 7e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 43967 TCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTA 44026 || |||| ||| || || ||||| |||| |||||||| ||| |||| | |||||||||| Sbjct 711845 TCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGAATACCTTCTTTA 711904 Query 44027 TCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATT 44086 ||| || || |||||| | ||| ||| || | | || || |||| || || Sbjct 711905 TCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTACCTCGAGGGTGATG 711964 Query 44087 GTTTTACCGGTTAAAGTCTTCACAAATATTTGCATGTCGAGTCT 44130 ||||| || || | ||| |||||||| |||||||||| || ||| Sbjct 711965 GTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATGTTGAATCT 712008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354720274370184