Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq13072 104 3e-17 >seq13072 Length=199900 Score = 104 bits (114), Expect = 3e-17 Identities = 200/295 (68%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 6938 CCGTGAGTGAGATGGCCGCCGCAGTCCAAGGACATAGCGAGAACCGAATCACCCGGCTTC 6997 || ||||| |||||||| || || || || | | || | || ||| ||||| | Sbjct 181101 CCATGAGTTAGATGGCCACCACAACTCAGCGATAATCCAAGTATCGTATCGCCCGGAGTA 181042 Query 6998 AGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCG 7057 || |||| | ||||| || ||||| || ||||| || ||||||||||| ||||| Sbjct 181041 AGCAGTGAAGCAAATACTGCTTGATTTGCCTGAGAACCAGAGTGAGGTTGAACATTTGCA 180982 Query 7058 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATTTCATCGGCT 7117 || || || |||||||| | | ||| || || || || || | |||||| | Sbjct 180981 AACTTAACACCAAACAGTTTGCAAAGCCTCTCTATAGCTAGATTTTCAACTTCATCTACA 180922 Query 7118 TTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTAAAA 7177 | | ||||| | |||||| | ||| || ||||| || || |||||||| || || | Sbjct 180921 TAGTCACAGCCACAATAATATCTTTTACCAGGATACCCTTCTGCATACTTATTAGTCAGG 180862 Query 7178 ATAGAACCCTGTGCTTTCATAACATCGTCTGACACATAGTTTTCGGACGCAATCA 7232 | ||| ||||| |||| ||| || | | || ||||||| || ||||||| Sbjct 180861 AAAGAGCCCTGCGCTTCCATCACTGCTTTACTTGCAAAGTTTTCTGATGCAATCA 180807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555271162433680